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Expanding success in the isolation of abundant marine bacteria after reduction in grazing and viral pressure and increase in nutrient availability
ABSTRACT Isolation of microorganisms is a useful approach to gathering knowledge about their genomic properties, physiology, and …
Xavier Rey Velasco
,
Ona Deulofeu-Capo
,
Isabel Sanz-Sáez
,
Clara Cardelús
,
Isabel Ferrera
,
Josep M. Gasol
,
Olga Sánchez
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URL
Top abundant deep ocean heterotrophic bacteria can be retrieved by cultivation
Traditional culture techniques usually retrieve a small fraction of the marine microbial diversity, which mainly belong to the …
Isabel Sanz-Sáez
,
Pablo Sánchez
,
Guillem Salazar
,
Shinichi Sunagawa
,
Colomban De Vargas
,
Chris Bowler
,
Matthew B Sullivan
,
Patrick Wincker
,
Eric Karsenti
,
Carlos Pedrós-Alió
,
Susana Agustí
,
Takashi Gojobori
,
Carlos M Duarte
,
Josep M. Gasol
,
Olga Sánchez
,
Silvia G. Acinas
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Inter-comparison of marine microbiome sampling protocols
Research on marine microbial communities is growing, but studies are hard to compare because of variation in seawater sampling …
Francisco Pascoal
,
Maria Paola Tomasino
,
Roberta Piredda
,
Grazia Marina Quero
,
Luís Torgo
,
Julie Poulain
,
Pierre E Galand
,
Jed a Fuhrman
,
Alex Mitchell
,
Tinkara Tinta
,
Timotej Turk Dermastia
,
Antonio Fernandez-Guerra
,
Alessandro Vezzi
,
Ramiro Logares
,
Francesca Malfatti
,
Hisashi Endo
,
Anna Maria Dąbrowska
,
Fabio De Pascale
,
Pablo Sánchez
,
Nicolas Henry
,
Bruno Fosso
,
Bryan Wilson
,
Stephan Toshchakov
,
Gregory Kevin Ferrant
,
Ivo Grigorov
,
Fabio Rocha Jimenez Vieira
,
Rodrigo Costa
,
Stéphane Pesant
,
Catarina Magalhães
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URL
Seasonality of biogeochemically relevant microbial genes in a coastal ocean microbiome
Abstract Microbes drive the biogeochemical cycles of marine ecosystems through their vast metabolic diversity. While we have a fairly …
Adrià Auladell
,
Isabel Ferrera
,
Lidia Montiel Fontanet
,
Célio Dias Santos Júnior
,
Marta Sebastián
,
Ramiro Logares
,
Josep M. Gasol
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URL
Choanoflagellates alongside diverse uncultured predatory protists consume the abundant open-ocean cyanobacterium *Prochlorococcus*
Prochlorococcus is a key member of open-ocean primary producer communities. Despite its importance, little is known about the predators …
Susanne Wilken
,
Charmaine C M Yung
,
Camille Poirier
,
Ramon Massana
,
Valeria Jimenez
,
Alexandra Z Worden
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Editorial: Women in aquatic microbiology: 2022
Annika Vaksmaa
,
Alessandra Adessi
,
Maria M. Sala
,
Alison Buchan
,
Catarina M Magalhães
,
Adriane Clark Jones
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URL
Editorial: Women in aquatic microbiology: 2022
Annika Vaksmaa
,
Alessandra Adessi
,
Maria M. Sala
,
Alison Buchan
,
Catarina M Magalhães
,
Adriane Clark Jones
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URL
Gene expression dynamics of natural assemblages of heterotrophic flagellates during bacterivory
Abstract Background Marine heterotrophic flagellates (HF) are dominant bacterivores in the ocean, where they represent the trophic …
Aleix Obiol
,
David López-Escardó
,
Eric D. Salomaki
,
Monika M. Wiśniewska
,
Irene Forn
,
Elisabet L. Sà
,
Dolors Vaqué
,
Martin Kolísko
,
Ramon Massana
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A Metagenomic and Amplicon Sequencing Combined Approach Reveals the Best Primers to Study Marine Aerobic Anoxygenic Phototrophs
Studies based on protein-coding genes are essential to describe the diversity within bacterial functional groups. In the case of …
Carlota R Gazulla
,
Ana María Cabello
,
Pablo Sánchez
,
Josep M. Gasol
,
Olga Sánchez
,
Isabel Ferrera
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Water mass age structures the auxiliary metabolic gene content of free-living and particle-attached deep ocean viral communities
Abstract Background Viruses play important roles in the ocean’s biogeochemical cycles. Yet, deep ocean viruses are one of the most …
Felipe H. Coutinho
,
Cynthia B Silveira
,
Marta Sebastián
,
Pablo Sánchez
,
Carlos M Duarte
,
Dolors Vaqué
,
Josep M. Gasol
,
Silvia G. Acinas
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