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Metagenomic 16S rDNA Illumina tags are a powerful alternative to amplicon sequencing to explore diversity and structure of microbial communities
Summary Sequencing of 16S rDNA polymerase chain reaction ( PCR ) amplicons is the most common approach for investigating environmental …
Ramiro Logares
,
Shinichi Sunagawa
,
Guillem Salazar
,
Francisco M. Cornejo-Castillo
,
Isabel Ferrera
,
Hugo Sarmento
,
Pascal Hingamp
,
Hiroyuki Ogata
,
Colomban De Vargas
,
Gipsi Lima-Mendez
,
Jeroen Raes
,
Julie Poulain
,
Olivier Jaillon
,
Patrick Wincker
,
Stefanie Kandels-Lewis
,
Eric Karsenti
,
Peer Bork
,
Silvia G. Acinas
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URL
Production of dissolved organic matter by phytoplankton and its uptake by heterotrophic prokaryotes in large tropical lakes
In pelagic ecosystems, phytoplankton extracellular release can extensively subsidize the heterotrophic prokaryotic carbon demand. …
Cedric Morana
,
Hugo Sarmento
,
Jean-Pierre Descy
,
Josep M. Gasol
,
Alberto v Borges
,
Steven Bouillon
,
François Darchambeau
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URL
The others: our biased perspective of eukaryotic genomes
Javier del Campo
,
Michael E Sieracki
,
Robert Molestina
,
Patrick Keeling
,
Ramon Massana
,
Iñaki Ruiz-Trillo
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The phylogenetic and ecological context of cultured and whole genome-sequenced planktonic bacteria from the coastal NW Mediterranean Sea
Itziar Lekunberri
,
Josep M. Gasol
,
Silvia G. Acinas
,
Laura Gómez-Consarnau
,
Bibiana G Crespo
,
Emilio O Casamayor
,
Ramon Massana
,
Carlos Pedrós-Alió
,
Jarone Pinhassi
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URL
Exploring the uncultured microeukaryote majority in the oceans: reevaluation of ribogroups within stramenopiles
Abstract Molecular surveys in planktonic marine systems have unveiled a large novel diversity of small protists. A large part of this …
Ramon Massana
,
Javier del Campo
,
Michael E Sieracki
,
Stéphane Audic
,
Ramiro Logares
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URL
Patterns of Rare and Abundant Marine Microbial Eukaryotes
Ramiro Logares
,
Stéphane Audic
,
David Bass
,
Lucie Bittner
,
Christophe Boutte
,
Richard Christen
,
Jean-Michel Claverie
,
Johan Decelle
,
John R Dolan
,
Micah Dunthorn
,
Bente Edvardsen
,
Angélique Gobet
,
Wiebe H.C.F Kooistra
,
Frédéric Mahé
,
Fabrice Not
,
Hiroyuki Ogata
,
Jan Pawlowski
,
Massimo C. Pernice
,
Sarah Romac
,
Kamran Shalchian-Tabrizi
,
Nathalie Simon
,
Thorsten Stoeck
,
Sébastien Santini
,
Raffaele Siano
,
Patrick Wincker
,
Adriana Zingone
,
Thomas a Richards
,
Colomban De Vargas
,
Ramon Massana
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URL
Spatial and temporal variability among marine Bacteroidetes populations in the NW Mediterranean Sea
Cristina Díez-Vives
,
Josep M. Gasol
,
Silvia G. Acinas
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URL
Antibiotic Resistance is Widespread in Urban Aquatic Environments of Rio de Janeiro, Brazil
Felipe H. Coutinho
,
Cynthia B. Silveira
,
Leonardo H. Pinto
,
Gigliola R. B. Salloto
,
Alexander M. Cardoso
,
Orlando B. Martins
,
Ricardo P. Vieira
,
Maysa M. Clementino
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URL
Bacterial production and losses to predators along an open ocean productivity gradient in the Subtropical North East Atlantic Ocean
Dolors Vaqué
,
Laura Alonso-Sáez
,
Javier Arístegui
,
Susana Agustí
,
Carlos M Duarte
,
Maria Montserrat Sala
,
Evaristo Vázquez-Domínguez
,
Josep M. Gasol
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URL
Changes in bacterial metabolism as a response to dissolved organic matter modification during protozoan grazing in coastal Cantabrian and Mediterranean waters
Summary We explored how marine dissolved organic matter ( DOM ) altered by bacterial growth and protozoan grazing modify the metabolism …
Zuriñe Baña
,
Begoña Ayo
,
Cèlia Marrasé
,
Josep M. Gasol
,
Juan Iriberri
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