Publications | Ecology of Marine Microbes

Xabier López-Alforja, Elisabet L. Sà, Maria v Quiroga, Massimo C. Pernice, Clara Cardelús, Vanessa Balagué, Josep M. Gasol, Felipe H. Coutinho, Ramon Massana, Dolors Vaqué (2025). Long-term decline of marine viruses associated with warming and oligotrophication at a NW Mediterranean coastal site. 5, .

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Dolors Vaqué, Elisa Berdalet, Ana Sotomayor-Garcia, Marta Estrada, Miguel Cabrera-Brufau, Marta Masdeu-Navarro, Arianna Rochi, Xabier López-Alforja, Magda Vila, Célia Marrasé, Rafel Simó, Manuel Dall'Osto, Maria Monserrat Sala (2025). Assessing the relationship between viruses and protists and their role in dimethylsulphoniopropionate release in Antarctic surface microlayers. 37, 265-277.

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Luca Schenone, Leonardo Capitani, Ulises Lora, Outi Setälä, Hermanni Kaartokallio, Jukka Seppälä, Maiju Lehtiniemi (2025). Microbial plankton uptake enhances the degradation of a biodegradable microplastic. Environmental Pollution, 374, 126252.

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Marta Royo-Llonch, Vanessa Balagué, Elisabetta Broglio, David Casas, Lúa Coderch, Mariona Moncunill, María Fernanda Moscoso (2025). Espigando el campo de la colaboración entre arte y ciencia: un prototipo de ecología de datos. Artnodes. Revista de Arte, Ciencia y Tecnología,

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Jon Iriarte, Daniel Lundin, Alícia Martinez-Varela, José M. Gónzalez, Pablo Sánchez, Jordi Dachs, Maria Vila-Costa (2025). Entanglement of hydrocarbon-degrading bacteria and polycyclic aromatic hydrocarbons in the ocean. Environmental Pollution, 379, 126512.

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Bishav Bhattarai, Ananda Shankar Bhattacharjee, Felipe H. Coutinho, Hanyan Li, Sreeni Chadalavada, Ramesh Goel (2025). Bacteriophages carry auxiliary metabolic genes related to energy, sulfur and phosphorus metabolism during a harmful algal bloom in a freshwater lake. Chemosphere, 370, 143819.

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Magda Vila, Vanessa Balagué, Clara Cardelús, Adelina Geyer, Santiago Giralt, Josep-Maria Gili, Dolors Vaqué (2025). Antarctic and Arctic science in the classroom and for society. Antarctic Science, 1--13.

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Ulises Lora, Luca Schenone, Irene Forn, Francesc Peters, Jonna Piiparinen, Hermanni Kaartokallio, Maiju Lehtiniemi, Maria Montserrat Sala (2024). Weak effects of conventional and biodegradable microplastics on marine microbial communities. Frontiers in Marine Science, 11,

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Marina Vila-Nistal, Ramiro Logares, Josep M. Gasol, Manuel Martinez-Garcia (2024). Time Series Data Provide Insights into the Evolution and Abundance of One of the Most Abundant Viruses in the Marine Virosphere: The Uncultured Pelagiphages vSAG 37-F6. Viruses, 16, 1669.

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Encarna Borrull, Mireia Mestre, Cèlia Marrasé, Josep M. Gasol, Maria Montserrat Sala (2024). Patterns of prokaryotic activity along the marine planktonic matter continuum. Science of The Total Environment, 946, 173921.

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Aleix Obiol, Javier del Campo, Colomban De Vargas, Frédéric Mahé, Ramon Massana (2024). How marine are Marine Stramenopiles (MAST)? A cross-system evaluation. FEMS Microbiology Ecology, 100, fiae130.

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Carlota R. Gazulla, Michal Koblížek, Jesús M. Mercado, Josep M. Gasol, Olga Sánchez, Isabel Ferrera (2024). Aerobic anoxygenic phototrophic bacteria correlate with picophytoplankton across the Atlantic Ocean but show unique vertical bioenergetics. Limnology and Oceanography, lno.12682.

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Elena Cerdán García, Xose Antón Álvarez-Salgado, Javier Arístegui, Antonio Martínez-Marrero, Mar Benavides (2024). Eddy-driven diazotroph distribution in the subtropical North Atlantic: horizontal variability prevails over particle sinking speed. Communications Biology, 7,

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Ryan F. Heneghan, Jacinta Holloway-Brown, Josep M. Gasol, Gerhard J. Herndl, XosÉ Anxelu G. MorÁn, Eric D. Galbraith (2024). The global distribution and climate resilience of marine heterotrophic prokaryotes. Nature Communications, 15, 6943.

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Isabel Ferrera, Adrià Auladell, Vanessa Balagué, Albert Reñé, Esther Garcés, Ramon Massana, Josep M. Gasol (2024). Seasonal and interannual variability of the free-living and particle-associated bacteria of a coastal microbiome. Environmental Microbiology Reports, 16, e13299.

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Isabel Sanz-Sáez, Andrea G. Bravo, Marta Ferri, Joan-Martí Carreras, Olga Sánchez, Marta Sebastián, Clara Ruiz-González, Eric Capo, Carlos M. Duarte, Josep M. Gasol, Pablo Sánchez, Silvia G. Acinas (2024). Microorganisms Involved in Methylmercury Demethylation and Mercury Reduction are Widely Distributed and Active in the Bathypelagic Deep Ocean Waters. Environmental Science & Technology, 58, 13795-13807.

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Nathan R Geraldi, Silvia G. Acinas, Intikhab Alam, Josep M. Gasol, María Luz Fernández-De-Puelles, Caterina R. Giner, Santiago Hernández-León, Ramiro Logares, Ramon Massana, Pablo Sánchez, Vladimir Bajic, Takashi Gojobori, Carlos M Duarte (2024). Assessing patterns of metazoans in the global ocean using environmental DNA. Royal Society Open Science, 11, 240724.

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Paula Huber, Daniele De Angelis, Hugo Sarmento, Sebastian Metz, Caterina R. Giner, Colomban De Vargas, Luigi Maiorano, Ramon Massana, Ramiro Logares (2024). Global distribution, diversity, and ecological niche of Picozoa, a widespread and enigmatic marine protist lineage. Microbiome, 12, 162.

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Eric J. Raes, Shannon Myles, Liam MacNeil, Matthias Wietz, Christina Bienhold, Karen Tait, Paul J. Somerfield, Andrew Bissett, Jodie Van De Kamp, Josep M. Gasol, Ramon Massana, Yi-Chun Yeh, Jed A. Fuhrman, Julie LaRoche (2024). Seasonal patterns of microbial diversity across the world oceans. Limnology and Oceanography Letters, 9, 512-523.

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Jonah Díaz-Cruz, Effrosyni Fatira, Víctor M. Tuset, Adriana Rodríguez, José M. Landeira (2024). Applying geometric morphometrics in megalopa larval stages: relevance for species distribution and biological invasion studies. Contributions to Zoology, 93, 396 - 418.

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Xavier Rey Velasco, Teresa Lucena, Ana Belda, Josep M. Gasol, Olga Sánchez, David R. Arahal, María J. Pujalte (2024). Genomic and phenotypic characterization of 26 novel marine bacterial strains with relevant biogeochemical roles and widespread presence across the global ocean. Frontiers in Microbiology, 15, 1407904.

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Massimo C. Pernice, Irene Forn, Ramiro Logares, Ramon Massana (2024). A fungi hotspot deep in the ocean: explaining the presence of Gjaerumia minor in equatorial Pacific bathypelagic waters. Scientific Reports, 14, 10601.

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Carla Pereira García, Elena H Del Amo, Núria Vigués, Xavier Rey Velasco, Blanca Rincón-Tomás, Carla Pérez-Cruz, Isabel Sanz-Sáez, Haiyan Hu, Stefan Bertilsson, Angela Pannier, Ulrich Soltmann, Pablo Sánchez, Silvia G. Acinas, Andrea G. Bravo, Laura Alonso-Sáez, Olga Sánchez (2024). Unmasking the physiology of mercury detoxifying bacteria from polluted sediments. Journal of Hazardous Materials, 467, 133685.

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Ramon Massana (2024). The nitroplast: A nitrogen-fixing organelle. Science, 384, 160-161.

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Michal Koblížek, Isabel Ferrera, Eva Kolářová, Solange Duhamel, Kimberly J. Popendorf, Josep M. Gasol, Benjamin A. S. Van Mooy (2024). Growth and mortality of aerobic anoxygenic phototrophs in the North Pacific Subtropical Gyre. Applied and Environmental Microbiology, 90, e00032-24.

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Maribel I. García-Ibáñez, Elisa F. Guallart, Arturo Lucas, Josep Pascual, Josep M. Gasol, Cèlia Marrasé, Eva Calvo, Carles Pelejero (2024). Two new coastal time-series of seawater carbonate system variables in the NW Mediterranean Sea: rates and mechanisms controlling pH changes. Frontiers in Marine Science, 11, 1348133.

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Marta Sebastián, Pablo Sánchez, Guillem Salazar, Xosé a Álvarez-Salgado, Isabel Reche, Xosé Anxelu G Morán, Maria Montserrat Sala, Carlos M Duarte, Silvia G. Acinas, Josep M. Gasol (2024). Water aging and the quality of organic carbon sources drive niche partitioning of the active bathypelagic prokaryotic microbiome. Limnology and Oceanography, 69, 562-575.

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C. M. Richardson, K. L. Davis, Clara Ruiz-González, J. A. Guimond, H. A. Michael, A. Paldor, N. Moosdorf, A. Paytan (2024). The impacts of climate change on coastal groundwater. Nature Reviews Earth & Environment, 5, 100--119.

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Marta Sebastián, Caterina R. Giner, Vanessa Balagué, Markel Gómez-Letona, Ramon Massana, Ramiro Logares, Carlos M Duarte, Josep M. Gasol (2024). The active free-living bathypelagic microbiome is largely dominated by rare surface taxa. ISME Communications, 4, ycae015.

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Elisa Laiolo, Intikhab Alam, Mahmut Uludag, Tahira Jamil, Susana Agusti, Takashi Gojobori, Silvia G. Acinas, Josep M. Gasol, Carlos M. Duarte (2024). Metagenomic probing toward an atlas of the taxonomic and metabolic foundations of the global ocean genome. Frontiers in Science, 1, 2813-6330.

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Bishav Bhattarai, Ananda Shankar Bhattacharjee, Felipe H. Coutinho, Ramesh Goel (2024). Investigating the viral ecology and contribution to the microbial ecology in full-scale mesophilic anaerobic digesters. Chemosphere, 349, 140743.

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Etienne Richy, Pedro J. Cabello-Yeves, Felipe H. Coutinho, Francisco Rodriguez-Valera, Iván González-Álvarez, Laure Gandois, François Rigal, Béatrice Lauga (2024). How microbial communities shape peatland carbon dynamics: New insights and implications. Soil Biology and Biochemistry, 191, 109345.

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Natascha S Varona, Poppy J Hesketh-Best, Felipe H. Coutinho, Alexandra K Stiffler, Bailey a Wallace, Sofia L Garcia, Yun Scholten, Andreas F Haas, Mark Little, Mark Vermeij, Antoni Luque, Cynthia Silveira (2024). Host-specific viral predation network on coral reefs. The ISME Journal, wrae240.

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Catalina Mena, Ona Deulofeu-Capo, Irene Forn, Júlia Dordal-Soriano, Yulieth a Mantilla-Arias, Iván P Samos, Marta Sebastián, Clara Cardelús, Ramon Massana, Cristina Romera-Castillo, Rebeca Mallenco-Fornies, Josep M. Gasol, Clara Ruiz-González (2024). High amino acid osmotrophic incorporation by marine eukaryotic phytoplankton revealed by click chemistry. ISME Communications, 4, ycae004.

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Ona Deulofeu-Capo, Marta Sebastián, Adrià Auladell, Clara Cardelús, Isabel Ferrera, Olga Sánchez, Josep M Gasol (2024). Growth rates of marine prokaryotes are extremely diverse, even among closely related taxa. ISME Communications, 4, ycae066.

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Carla Pereira-Garcia, Isabel Sanz-Sáez, Pablo Sánchez, Felipe H. Coutinho, Andrea G. Bravo, Olga Sánchez, Silvia G. Acinas (2024). Genomic and transcriptomic characterization of methylmercury detoxification in a deep ocean Alteromonas mediterranea ISS312. Environmental Pollution, 347, 123725.

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Ina M Deutschmann, Erwan Delage, Caterina R. Giner, Marta Sebastián, Julie Poulain, Javier Arístegui, Carlos M Duarte, Silvia G. Acinas, Ramon Massana, Josep M. Gasol, Damien Eveillard, Samuel Chaffron, Ramiro Logares (2024). Disentangling microbial networks across pelagic zones in the tropical and subtropical global ocean. Nature Communications, 15, 126.

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Anthony M. Bonacolta, Jordi Miravall, Daniel Gómez-Gras, Jean Baptiste Ledoux, Paula López-Sendino, Joaquim Garrabou, Ramon Massana, Javier del Campo (2024). Differential apicomplexan presence predicts thermal stress mortality in the Mediterranean coral Paramuricea clavata. Environmental Microbiology, 26, e16548.

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Fernando Puente-Sánchez, Luis Alberto Macías-Pérez, Karley L Campbell, Marta Royo-Llonch, Vanessa Balagué, Pablo Sánchez, Javier Tamames, Christopher John Mundy, Carlos Pedrós-Alió (2024). Bacterioplankton taxa compete for iron along the early spring–summer transition in the Arctic Ocean. Ecology and Evolution, 14, e11546.

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Carolina Marín Vindas, Marta Sebastián, Clara Ruiz-González, Vanessa Balagué, Luis Vega-Corrales, Josep M. Gasol (2023). Shifts in bacterioplankton community structure between dry and wet seasons in a tropical estuary strongly affected by riverine discharge. Science of The Total Environment, 903, 166104.

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Sergio M. Vallina, Charlie Gaborit, Celia Marrase, Josep M. Gasol, Nixon Bahamon, Michael J. Follows, Guillaume Le Gland, Pedro Cermeño (2023). Seasonal dynamics of phytoplankton community assembly at the Blanes Bay Microbial Observatory (BBMO), NW Mediterranean Sea. Progress in Oceanography, 219, 103125.

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Julia Martinez-Sanchez, Leticia Castrillo, Didac Jerez, Sergi Torramade-Moix, Marta Palomo, Guiomar Mendieta, M Urooj Zafar, Ana Belén Moreno-Castaño, Pablo Sánchez, Juan Jose Badimon, Maribel Diaz-Ricart, Gines Escolar, Mercè Roqué (2023). Antithrombotic and prohemorrhagic actions of different concentrations of apixaban in patients exposed to single and dual antiplatelet regimens. Scientific Reports, 13, 1-12.

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Sebastian Metz, Sarah Itoïz, Aleix Obiol, Evelyne Derelle, Ramon Massana, Cédric Berney, Colomban De Vargas, Philippe Soudant, Adam Monier, Aurélie Chambouvet (2023). Global perspective of environmental distribution and diversity of Perkinsea (Alveolata) explored by a meta-analysis of eDNA surveys. Scientific Reports, 13, 20111.

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Pedro C Junger, Hugo Sarmento, Caterina R. Giner, Mireia Mestre, Marta Sebastián, Xosé Anxelu G Morán, Javier Arístegui, Susana Agustí, Carlos M Duarte, Silvia G. Acinas, Ramon Massana, Josep M. Gasol, Ramiro Logares (2023). Global biogeography of the smallest plankton across ocean depths. Science Advances, 9, eadg9763.

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Xavier Rey Velasco, Ona Deulofeu-Capo, Isabel Sanz-Sáez, Clara Cardelús, Isabel Ferrera, Josep M. Gasol, Olga Sánchez (2023). Expanding success in the isolation of abundant marine bacteria after reduction in grazing and viral pressure and increase in nutrient availability. Microbiology Spectrum, 11, e00890-23.

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Isabel Sanz-Sáez, Pablo Sánchez, Guillem Salazar, Shinichi Sunagawa, Colomban De Vargas, Chris Bowler, Matthew B Sullivan, Patrick Wincker, Eric Karsenti, Carlos Pedrós-Alió, Susana Agustí, Takashi Gojobori, Carlos M Duarte, Josep M. Gasol, Olga Sánchez, Silvia G. Acinas (2023). Top abundant deep ocean heterotrophic bacteria can be retrieved by cultivation. ISME Communications, 3, 1-13.

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Adrià Auladell, Isabel Ferrera, Lidia Montiel, Célio Dias Santos Júnior, Marta Sebastián, Ramiro Logares, Josep M. Gasol (2023). Seasonality of biogeochemically relevant microbial genes in a coastal ocean microbiome. Environmental Microbiology, 25, 1465-1483.

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Susanne Wilken, Charmaine C M Yung, Camille Poirier, Ramon Massana, Valeria Jimenez, Alexandra Z Worden (2023). Choanoflagellates alongside diverse uncultured predatory protists consume the abundant open-ocean cyanobacterium Prochlorococcus. Proceedings of the National Academy of Sciences, 120, e2302388120.

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Aleix Obiol, David López-Escardó, Eric D. Salomaki, Monika M. Wiśniewska, Irene Forn, Elisabet L. Sà, Dolors Vaqué, Martin Kolísko, Ramon Massana (2023). Gene expression dynamics of natural assemblages of heterotrophic flagellates during bacterivory. Microbiome, 11, 134.

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Annika Vaksmaa, Alessandra Adessi, Maria Montserrat Sala, Alison Buchan, Catarina M Magalhães, Adriane Clark Jones (2023). Editorial: Women in aquatic microbiology: 2022. Frontiers in Microbiology, 14, 1225575.

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Annika Vaksmaa, Alessandra Adessi, Maria Montserrat Sala, Alison Buchan, Catarina M Magalhães, Adriane Clark Jones (2023). Editorial: Women in aquatic microbiology: 2022. Frontiers in Microbiology, 14, 1225575.

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Felipe H. Coutinho, Cynthia B. Silveira, Marta Sebastián, Pablo Sánchez, Carlos M. Duarte, Dolors Vaqué, Josep M. Gasol, Silvia G. Acinas (2023). Water mass age structures the auxiliary metabolic gene content of free-living and particle-attached deep ocean viral communities. Microbiome, 11, 118.

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Carlota R Gazulla, Ana María Cabello, Pablo Sánchez, Josep M. Gasol, Olga Sánchez, Isabel Ferrera (2023). A Metagenomic and Amplicon Sequencing Combined Approach Reveals the Best Primers to Study Marine Aerobic Anoxygenic Phototrophs. Microbial Ecology,

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Ina Maria Deutschmann, Anders K Krabberød, Francisco Latorre, Erwan Delage, Cèlia Marrasé, Vanessa Balagué, Josep M. Gasol, Ramon Massana, Damien Eveillard, Samuel Chaffron, Ramiro Logares (2023). Disentangling temporal associations in marine microbial networks. Microbiome, 11, 83.

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Noemí Inmaculada Medina-Pérez, Elena Cerdán García, Francesc Rubió, Laia Viure, Marta Estrada, Encarnación Moyano, Elisa Berdalet (2023). Progress on the Link between Nutrient Availability and Toxin Production by Ostreopsis cf. ovata: Field and Laboratory Experiments. Toxins, 188, 15-3.

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David K Ngugi, Silvia G. Acinas, Pablo Sánchez, Josep M. Gasol, Susana Agusti, David M Karl, Carlos M Duarte (2023). Abiotic selection of microbial genome size in the global ocean. Nature Communications, 14, 1384.

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Viena Puigcorbé, Clara Ruiz-González, Pere Masqué, Josep M. Gasol (2023). Impact of particle flux on the vertical distribution and diversity of size-fractionated prokaryotic communities in two East Antarctic polynyas. Frontiers in Microbiology, 14, 1078469.

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Georgina L. Brennan, Ramiro Logares (2023). Tracking contemporary microbial evolution in a changing ocean. 31, 336--345.

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Markel Gómez‐Letona, Javier Arístegui, Nauzet Hernández‐Hernández, María Pérez‐Lorenzo, Xosé Antón Álvarez‐Salgado, Eva Teira, Marta Sebastián (2023). Surface productivity gradients govern changes in the viability of deep ocean prokaryotes across the tropical and subtropical Atlantic. Limnology and Oceanography, 68, 56--69.

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Simon Roux, Antonio Pedro Camargo, Felipe H. Coutinho, Shareef M. Dabdoub, Bas E. Dutilh, Stephen Nayfach, Andrew Tritt (2023). iPHoP: An integrated machine learning framework to maximize host prediction for metagenome-derived viruses of archaea and bacteria. PLOS Biology, 21, e3002083.

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Felipe A.S. Barbosa, Leonardo A.S. Brait, Felipe H. Coutinho, Camilo M. Ferreira, Eduardo Freitas Moreira, Lucas De Queiroz Salles, Pedro Milet Meirelles (2023). Ecological landscape explains aquifers microbial structure. Science of The Total Environment, 862, 160822.

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Cristiane C. Thompson, Diogo Tschoeke, Felipe H. Coutinho, Luciana Leomil, Gizele D. Garcia, Koko Otsuki, Bruno J. Turcq, Luciane S. Moreira, Patrícia F. M. Turcq, Renato C. Cordeiro, Nils E. Asp, Fabiano L. Thompson (2023). Diversity of Microbiomes Across a 13,000-Year-Old Amazon Sediment. Microbial Ecology, 86, 2202--2209.

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Massimo C. Pernice, Josep M. Gasol (2023). Automated flow cytometry as a tool to obtain a fine-grain picture of marine prokaryote community structure along an entire oceanographic cruise. Frontiers in Microbiology, 13, 1064112.

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Juan José Pierella Karlusich, Eric Pelletier, Lucie Zinger, Fabien Lombard, Adriana Zingone, Sébastien Colin, Josep M. Gasol, Richard G. Dorrell, Nicolas Henry, Eleonora Scalco, Silvia G. Acinas, Patrick Wincker, Colomban De Vargas, Chris Bowler (2023). A robust approach to estimate relative phytoplankton cell abundances from metagenomes. Molecular Ecology Resources, 23, 16-40.

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Leire Garate, Laura Alonso-Sáez, Marta Revilla, Ramiro Logares, Anders Lanzén (2022). Shared and contrasting associations in the dynamic nano- and picoplankton communities of two close but contrasting sites from the Bay of Biscay. Environmental Microbiology, 24, 6052-6070.

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Jarone Pinhassi, Hanna Farnelid, Sandra Martínez García, Eva Teira, Pierre E. Galand, Ingrid Obernosterer, Christopher Quince, Maria Vila-Costa, Josep M. Gasol, Daniel Lundin, Anders F. Andersson, Matthias Labrenz, Lasse Riemann (2022). Functional responses of key marine bacteria to environmental change – toward genetic counselling for coastal waters. Frontiers in Microbiology, 13, 869093.

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Clara Ruiz-González, Lara Rodríguez-Pie, Olena Maister, Valentí Rodellas, Aaron Alorda-Keinglass, Marc Diego-Feliu, Albert Folch, Jordi Garcia-Orellana, Josep M. Gasol (2022). High spatial heterogeneity and low connectivity of bacterial communities along a Mediterranean subterranean estuary. Molecular Ecology, 31, 5745-5764.

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Ernesto Villarino, James R Watson, Guillem Chust, A John Woodill, Benjamin Klempay, Bror Jonsson, Josep M. Gasol, Ramiro Logares, Ramon Massana, Caterina R. Giner, Guillem Salazar, X Anton Alvarez-Salgado, Teresa S Catala, Carlos M Duarte, Susana Agusti, Francisco Mauro, Xabier Irigoien, Andrew D Barton (2022). Global beta diversity patterns of microbial communities in the surface and deep ocean. Global Ecology and Biogeography, 31, 2323-2336.

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Guolin Ma, Ramiro Logares, Yuanyuan Xue, Jun Yang (2022). Does filter pore size introduce bias in DNA sequence-based plankton community studies?. Frontiers in Microbiology, 13, 969799.

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Sebastiaan Koppelle, David López-Escardó, Corina P.D Brussaard, Jef Huisman, Catharina J.M Philippart, Ramon Massana, Susanne Wilken (2022). Mixotrophy in the bloom-forming genus Phaeocystis and other haptophytes. Harmful Algae, 117, 102292.

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Mahwash Jamy, Charlie Biwer, Daniel Vaulot, Aleix Obiol, Hongmei Jing, Sari Peura, Ramon Massana, Fabien Burki (2022). Global patterns and rates of habitat transitions across the eukaryotic tree of life. Nature Ecology & Evolution, 6, 1458-1470.

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Arianna Rocchi, Ana Sotomayor-Garcia, Miguel Cabrera-Brufau, Elisa Berdalet, Manuel Dall’Osto, Dolors Vaqué (2022). Abundance and activity of sympagic viruses near the Western Antarctic Peninsula. Polar Biology, 45, 1363-1378.

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Caroline Vernette, Julien Lecubin, Pablo Sánchez, Tara Oceans Coordinators, Shinichi Sunagawa, Tom O Delmont, Silvia G. Acinas, Eric Pelletier, Pascal Hingamp, Magali Lescot (2022). The Ocean Gene Atlas v2.0: online exploration of the biogeography and phylogeny of plankton genes. Nucleic Acids Research, 50, W516-W526.

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Anna Chiara Trano, Roberta Piredda, Cecilia Balestra, Mauro Bastianini, Josep M. Gasol, Raffaella Casotti (2022). Diversity of Free-Living and Particle-Attached Prokaryotes in a River-Influenced Coastal Area of the Northern Adriatic Sea. Frontiers in Marine Science, 912528.

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Ramon Massana, David López-Escardó (2022). Metagenome assembled genomes are for eukaryotes too. Cell Genomics, 2, 100130.

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Anders K Krabberød, Ina M Deutschmann, Marit F M Bjorbækmo, Vanessa Balagué, Caterina R. Giner, Isabel Ferrera, Esther Garcés, Ramon Massana, Josep M. Gasol, Ramiro Logares (2022). Long-term patterns of an interconnected core marine microbiota. Environmental Microbiome, 17, 22.

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Carlota R Gazulla, Adrià Auladell, Clara Ruiz-González, Pedro C Junger, Marta Royo-Llonch, Carlos M Duarte, Josep M. Gasol, Olga Sánchez, Isabel Ferrera (2022). Global diversity and distribution of aerobic anoxygenic phototrophs in the tropical and subtropical oceans. Environmental Microbiology, 24, 2222-2238.

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Raquel Rodríguez-Martínez, Dolors Vaqué, Irene Forn, Ramon Massana (2022). Dominant marine heterotrophic flagellates are adapted to natural planktonic bacterial abundances. Environmental Microbiology, 24, 2421-2434.

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Isabel Sanz-Sáez, Carla Pereira García, Andrea G. Bravo, Laura Trujillo, Martí Pla I Ferriol, Miguel Capilla, Pablo Sánchez, Rosa Carmen Rodríguez Martín-Doimeadios, Silvia G. Acinas, Olga Sánchez (2022). Prevalence of Heterotrophic Methylmercury Detoxifying Bacteria across Oceanic Regions. Environmental Science & Technology, 56, 3452-3461.

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Marta Palomo, Lina Youssef, Alex Ramos, Sergi Torramade-Moix, Ana Belen Moreno-Castaño, Julia Martinez-Sanchez, Laura Bonastre, Marc Pino, Pilar Gomez-Ramirez, Lidia Martin, Estefania Garcia Mateos, Pablo Sánchez, Sara Fernandez, Francesca Crovetto, Ginés Escolar, Enric Carreras, Pedro Castro, Eduard Gratacos, Fàtima Crispi, Maribel Diaz-Ricart (2022). Differences and similarities in endothelial and angiogenic profiles of preeclampsia and COVID-19 in pregnancy. American Journal of Obstetrics and Gynecology, S0002-9378(22)00227-7.

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Maria Montserrat Sala, Francesc Peters, Marta Sebastián, Clara Cardelús, Eva Calvo, Celia Marrasé, Ramon Massana, Carles Pelejero, Joan Sala-Coromina, Dolors Vaqué, Josep M. Gasol (2022). COVID-19 lockdown moderately increased oligotrophy at a marine coastal site. Science of The Total Environment, 812, 151443.

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Silvia G. Acinas, Marta Sebastián, Isabel Ferrera (2022). Towards a Global Perspective of the Marine Microbiome. 3, 357--394.

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Markel Gómez-Letona, Marta Sebastián, Isabel Baños, María Fernanda Montero, Clàudia Pérez Barrancos, Moritz Baumann, Ulf Riebesell, Javier Arístegui (2022). The importance of the dissolved organic matter pool for the carbon sequestration potential of artificial upwelling. Frontiers in Marine Science, 9, 969714.

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Stéphanie Birnstiel, Marta Sebastián, Cristina Romera-Castillo (2022). Structure and activity of marine bacterial communities responding to plastic leachates. Science of The Total Environment, 834, 155264.

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Adrià Auladell, Albert Barberán, Ramiro Logares, Esther Garcés, Josep M. Gasol, Isabel Ferrera (2022). Seasonal niche differentiation among closely related marine bacteria. 16, 178--189.

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Clara Martínez-Pérez, Chris Greening, Sean K Bay, Rachael J Lappan, Zihao Zhao, Daniele De Corte, Christina Hulbe, Christian Ohneiser, Craig Stevens, Blair Thomson, Ramunas Stepanauskas, José M González, Ramiro Logares, Gerhard J Herndl, Sergio E Morales, Federico Baltar (2022). Phylogenetically and functionally diverse microorganisms reside under the Ross Ice Shelf. Nature Communications, 13, 117.

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Miguel Cabrera-Brufau, Cèlia Marrasé, Eva Ortega-Retuerta, Sdena Nunes, Marta Estrada, Maria Montserrat Sala, Dolors Vaqué, Gonzalo L. Pérez, Rafel Simó, Pedro Cermeño (2022). Particulate and dissolved fluorescent organic matter fractionation and composition: Abiotic and ecological controls in the Southern Ocean. 844, 156921.

Cite URL

Nestor Arandia-Gorostidi, Anders K. Krabberød, Ramiro Logares, Ina Maria Deutschmann, Renate Scharek, XosÉ Anxelu G. MorÁn, Felipe González, Laura Alonso-Sáez (2022). Novel Interactions Between Phytoplankton and Bacteria Shape Microbial Seasonal Dynamics in Coastal Ocean Waters. 9, 901201.

Cite URL

José Germán Serrano-Gamboa, Carlos Abraham Fócil-Espinosa, Pedro J. Cabello-Yeves, Felipe H. Coutinho, Rafael Antonio Rojas-Herrera, Mónica Noel Sánchez-González (2022). Metatranscriptome Profiling of a Specialized Microbial Consortium during the Degradation of Nixtamalized Maize Pericarp. Microbiology Spectrum, 10, e02318--21.

Cite URL

Clara Arboleda-Baena, Claudia Belén Pareja, Isadora Pla, Ramiro Logares, Rodrigo De La Iglesia, Sergio Andrés Navarrete (2022). Hidden interactions in the intertidal rocky shore: variation in pedal mucus microbiota among marine grazers that feed on epilithic biofilm communities. 10, e13642.

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Markel Gómez-Letona, Javier Arístegui, Nauzet Hernández-Hernández, Xosé Antón Álvarez-Salgado, Marta Álvarez, Erick Delgadillo, María Pérez-Lorenzo, Eva Teira, Santiago Hernández-León, Marta Sebastián (2022). Deep ocean prokaryotes and fluorescent dissolved organic matter reflect the history of the water masses across the Atlantic Ocean. Progress in Oceanography, 205, 102819.

Cite URL

Cristina Romera-Castillo, Stéphanie Birnstiel, Xosé Antón Álvarez-Salgado, Marta Sebastián (2022). Aged Plastic Leaching of Dissolved Organic Matter Is Two Orders of Magnitude Higher Than Virgin Plastic Leading to a Strong Uplift in Marine Microbial Activity. Frontiers in Marine Science, 9, 861557.

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Aleix Obiol, Imer Muhovic, Ramon Massana (2021). Oceanic heterotrophic flagellates are dominated by a few widespread taxa. Limnology and Oceanography, 66, 4240-4253.

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Marta Sebastián, Eva Ortega-Retuerta, Laura Gómez-Consarnau, Marina Zamanillo, Marta Álvarez, Javier Arístegui, Josep M. Gasol (2021). Environmental gradients and physical barriers drive the basin-wide spatial structuring of Mediterranean Sea and adjacent eastern Atlantic Ocean prokaryotic communities. Limnology and Oceanography, 66, 4077-4095.

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Elena Cerdán García, Alison Baylay, Despo Polyviou, Malcolm Woodward, Lewis Wrightson, Claire Mahaffey, Maeve Lohan, Mark Moore, Thomas Bibby, Julie Robidart (2021). Transcriptional responses of Trichodesmium to natural inverse gradients of Fe and P availability. The ISME Journal, 16, 1055-1064.

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Marta Royo-Llonch, Pablo Sánchez, Clara Ruiz-González, Guillem Salazar, Carlos Pedrós-Alió, Marta Sebastián, Karine Labadie, Lucas Paoli, Federico M Ibarbalz, Lucie Zinger, Benjamin Churcheward, Tara Oceans Coordinators, Marcel Babin, Peer Bork, Emmanuel Boss, Guy Cochrane, Colomban De Vargas, Gabriel Gorsky, Nigel Grimsley, Lionel Guidi, Pascal Hingamp, Daniele Iudicone, Olivier Jaillon, Stefanie Kandels, Fabrice Not, Hiroyuki Ogata, Stéphane Pesant, Nicole Poulton, Jeroen Raes, Christian Sardet, Sabrina Speich, Lars Setmmann, Matthew B Sullivan, Samuel Chaffron, Damien Eveillard, Eric Karsenti, Shinichi Sunagawa, Patrick Wincker, Lee Karp-Boss, Chris Bowler, Silvia G. Acinas (2021). Compendium of 530 metagenome-assembled bacterial and archaeal genomes from the polar Arctic Ocean. Nature Microbiology, 6, 1561-1574.

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Juan José Pierella Karlusich, Eric Pelletier, Fabien Lombard, Madeline Carsique, Etienne Dvorak, Sébastien Colin, Marc Picheral, Fran Cornejo-Castillo, Silvia G. Acinas, Rainer Pepperkok, Eric Karsenti, Colomban De Vargas, Patrick Wincker, Chris Bowler, Rachel a Foster (2021). Global distribution patterns of marine nitrogen-fixers by imaging and molecular methods. Nature Communications, 12, 4160.

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Francisco Latorre, Ina M Deutschmann, Aurélie Labarre, Aleix Obiol, Anders K Krabberød, Eric Pelletier, Michael E Sieracki, Corinne Cruaud, Olivier Jaillon, Ramon Massana, Ramiro Logares (2021). Niche adaptation promoted the evolutionary diversification of tiny ocean predators. Proceedings of the National Academy of Sciences, 118, e2020955118.

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Aurelie Labarre, David López-Escardó, Francisco Latorre, Guy Leonard, François Bucchini, Aleix Obiol, Corinne Cruaud, Michael E Sieracki, Olivier Jaillon, Patrick Wincker, Klaas Vandepoele, Ramiro Logares, Ramon Massana (2021). Comparative genomics reveals new functional insights in uncultured MAST species. The ISME Journal, 15, 1767-1781.

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Irina Izaguirre, Fernando Unrein, M Romina Schiaffino, Enrique Lara, David Singer, Vanessa Balagué, Josep M. Gasol, Ramon Massana (2021). Phylogenetic diversity and dominant ecological traits of freshwater Antarctic Chrysophyceae. Polar Biology, 44, 941-957.

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Sebastian Zeppenfeld, Manuela Van Pinxteren, Dominik Van Pinxteren, Heike Wex, Elisa Berdalet, Dolors Vaqué, Manuel Dall’Osto, Hartmut Herrmann (2021). Aerosol Marine Primary Carbohydrates and Atmospheric Transformation in the Western Antarctic Peninsula. ACS Earth and Space Chemistry, 5, 1032-1047.

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Andrea Malits, Julia a Boras, Vanessa Balagué, Eva Calvo, Josep M. Gasol, Cèlia Marrasé, Carles Pelejero, Jarone Pinhassi, Maria Montserrat Sala, Dolors Vaqué (2021). Viral-Mediated Microbe Mortality Modulated by Ocean Acidification and Eutrophication: Consequences for the Carbon Fluxes Through the Microbial Food Web. Frontiers in Microbiology, 12, 635821.

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Dolors Vaqué, Julia a Boras, Jesús Maria Arrieta, Susana Agustí, Carlos M Duarte, Maria Montserrat Sala (2021). Enhanced Viral Activity in the Surface Microlayer of the Arctic and Antarctic Oceans. Microorganisms, 9, 317.

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Bishav Bhattarai, Ananda S. Bhattacharjee, Felipe H. Coutinho, Ramesh K. Goel (2021). Viruses and Their Interactions With Bacteria and Archaea of Hypersaline Great Salt Lake. Frontiers in Microbiology, 12, 701414.

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Clara Ruiz-González, Valentí Rodellas, Jordi Garcia-Orellana (2021). The microbial dimension of submarine groundwater discharge: current challenges and future directions. FEMS Microbiology Reviews, 45, fuab010.

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Kema Malki, Natalie A. Sawaya, Michael J. Tisza, Felipe H. Coutinho, Karyna Rosario, Anna J. Székely, Mya Breitbart (2021). Spatial and Temporal Dynamics of Prokaryotic and Viral Community Assemblages in a Lotic System (Manatee Springs, Florida). Applied and Environmental Microbiology, 87, e00646--21.

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Yaiza M. Castillo, Irene Forn, Sheree Yau, XosÉ Anxelu G. MorÁn, Laura Alonso-Sáez, Néstor Arandia-Gorostidi, Dolors Vaqué, Marta Sebastián (2021). Seasonal dynamics of natural Ostreococcus viral infection at the single cell level using VirusFISH. 23, 3009--3019.

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Elena Cerro-Gálvez, Jordi Dachs, Daniel Lundin, María-Carmen Fernández-Pinos, Marta Sebastián, Maria Vila-Costa (2021). Responses of Coastal Marine Microbiomes Exposed to Anthropogenic Dissolved Organic Carbon. Environmental Science & Technology, 55, 9609--9621.

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Felipe H. Coutinho, Asier Zaragoza-Solas, Mario López-Pérez, Jakub Barylski, Andrzej Zielezinski, Bas E. Dutilh, Robert Edwards, Francisco Rodriguez-Valera (2021). RaFAH: Host prediction for viruses of Bacteria and Archaea based on protein content. Patterns, 2, 100274.

Cite URL

Bruno G. N. Andrade, Tobias Goris, Haithem Afli, Felipe H. Coutinho, Alberto M. R. Dávila, Rafael R. C. Cuadrat (2021). Putative mobilized colistin resistance genes in the human gut microbiome. BMC Microbiology, 21, 220.

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Kathryn Forcone, Felipe H. Coutinho, Giselle S. Cavalcanti, Cynthia B. Silveira (2021). Prophage Genomics and Ecology in the Family Rhodobacteraceae. Microorganisms, 9, 1115.

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Lucas P. P. Braga, Felipe H. Coutinho, Deyvid E. Amgarten, Witold Kot, Lars Hansen, João C. Setubal, Laurent Philippot (2021). Novel virocell metabolic potential revealed in agricultural soils by virus‐enriched soil metagenome analysis. Environmental Microbiology Reports, 13, 348--354.

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Maria Paz Ventero, Rafael R. C. Cuadrat, Inmaculada Vidal, Bruno G. N. Andrade, Carmen Molina-Pardines, Jose M. Haro-Moreno, Felipe H. Coutinho, Esperanza Merino, Luciana C. A. Regitano, Cynthia B. Silveira, Haithem Afli, Mario López-Pérez, Juan Carlos Rodríguez (2021). Nasopharyngeal Microbial Communities of Patients Infected With SARS-CoV-2 That Developed COVID-19. Frontiers in Microbiology, 12, 637430.

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Pauline C. Göller, Tabea Elsener, Dominic Lorgé, Natasa Radulovic, Viona Bernardi, Annika Naumann, Nesrine Amri, Ekaterina Khatchatourova, Felipe H. Coutinho, Martin J. Loessner, Elena Gómez-Sanz (2021). Multi-species host range of staphylococcal phages isolated from wastewater. Nature Communications, 12, 6965.

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Paulina Fermani, Sebastián Metz, Vanessa Balagué, Jean-Pierre Descy, Cédric Morana, Ramiro Logares, Ramon Massana, Hugo Sarmento (2021). Microbial eukaryote assemblages and potential novel diversity in four tropical East African Great Lakes. 97, fiab114.

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Ramon Massana, Aurelie Labarre, David López-Escardó, Aleix Obiol, François Bucchini, Thomas Hackl, Matthias G Fischer, Klaas Vandepoele, Denis v Tikhonenkov, Filip Husnik, Patrick J Keeling (2021). Gene expression during bacterivorous growth of a widespread marine heterotrophic flagellate. The ISME Journal, 15, 154-167.

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Felipe H. Coutinho, F.A.B. Von Meijenfeldt, J.M. Walter, J.M. Haro-Moreno, M. Lopéz-Pérez, M.C. Van Verk, C.C. Thompson, C.A.N. Cosenza, L. Appolinario, R. Paranhos, A. Cabral, B.E. Dutilh, F.L. Thompson (2021). Ecogenomics and metabolic potential of the South Atlantic Ocean microbiome. Science of The Total Environment, 765, 142758.

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Marta Sebastián, Irene Forn, Adrià Auladell, Markel Gómez-Letona, Maria Montserrat Sala, Josep M. Gasol, Cèlia Marrasé (2021). Differential recruitment of opportunistic taxa leads to contrasting abilities in carbon processing by bathypelagic and surface microbial communities. Environmental Microbiology, 23, 190-206.

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Miguel Cabrera-Brufau, Laura Arin, Maria Montserrat Sala, Pedro Cermeño, Cèlia Marrasé (2021). Diatom Dominance Enhances Resistance of Phytoplanktonic POM to Mesopelagic Microbial Decomposition. 8, 683354.

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María Teresa Camarena‐Gómez, Clara Ruiz‐González, Jonna Piiparinen, Tobias Lipsewers, Cristina Sobrino, Ramiro Logares, Kristian Spilling (2021). Bacterioplankton dynamics driven by interannual and spatial variation in diatom and dinoflagellate spring bloom communities in the Baltic Sea. Limnology and Oceanography, 66, 255--271.

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Bradley a Weiler, Elisabet L. Sà, Michael E Sieracki, Ramon Massana, Javier del Campo (2021). Mediocremonas mediterraneus, a New Member within the Developea. Journal of Eukaryotic Microbiology, 68, e12825.

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Isabel Sanz-Sáez, Guillem Salazar, Pablo Sánchez, Elena Lara, Marta Royo-Llonch, Elisabet L. Sà, Teresa Lucena, María J Pujalte, Dolors Vaqué, Carlos M Duarte, Josep M. Gasol, Carlos Pedrós-Alió, Olga Sánchez, Silvia G. Acinas (2020). Diversity and distribution of marine heterotrophic bacteria from a large culture collection. BMC Microbiology, 20, 207.

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Ramiro Logares, Ina M Deutschmann, Pedro C Junger, Caterina R. Giner, Anders K Krabberød, Thomas S B Schmidt, Laura Rubinat-Ripoll, Mireia Mestre, Guillem Salazar, Clara Ruiz-González, Marta Sebastián, Colomban De Vargas, Silvia G. Acinas, Carlos M Duarte, Josep M. Gasol, Ramon Massana (2020). Disentangling the mechanisms shaping the surface ocean microbiota. Microbiome, 8, 55.

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Olga Sánchez, Isabel Ferrera, Isabel Mabrito, Carlota R Gazulla, Marta Sebastián, Adrià Auladell, Carolina Marín Vindas, Clara Cardelús, Isabel Sanz-Sáez, Massimo C. Pernice, Cèlia Marrasé, Maria Montserrat Sala, Josep M. Gasol (2020). Seasonal impact of grazing, viral mortality, resource availability and light on the group-specific growth rates of coastal Mediterranean bacterioplankton. Scientific Reports, 10, 19773.

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Isabel Ferrera, Albert Reñé, David Funosas, Jordi Camp, Ramon Massana, Josep M. Gasol, Esther Garcés (2020). Assessment of microbial plankton diversity as an ecological indicator in the NW Mediterranean coast. Marine Pollution Bulletin, 160, 111691.

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Mireia Mestre, Juan Höfer, Maria Montserrat Sala, Josep M. Gasol (2020). Seasonal Variation of Bacterial Diversity Along the Marine Particulate Matter Continuum. Frontiers in Microbiology, 11, 1590.

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Viena Puigcorbé, Clara Ruiz-González, Pere Masqué, Josep M. Gasol (2020). Sampling Device-Dependence of Prokaryotic Community Structure on Marine Particles: Higher Diversity Recovered by in situ Pumps Than by Oceanographic Bottles. Frontiers in Microbiology, 11, 1645.

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Teresa Lucena, Isabel Sanz-Sáez, David R Arahal, Silvia G. Acinas, Olga Sánchez, Carlos Pedrós-Alió, Rosa Aznar, María J Pujalte (2020). Mesonia oceanica sp. nov., isolated from oceans during the Tara oceans expedition, with a preference for mesopelagic waters. International Journal of Systematic and Evolutionary Microbiology, 70, 4329-4338.

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Ana Sotomayor-Garcia, Maria Montserrat Sala, Isabel Ferrera, Marta Estrada, Evaristo Vázquez-Domínguez, Mikhail Emelianov, Pau Cortés, Cèlia Marrasé, Eva Ortega-Retuerta, Sdena Nunes, Yaiza M Castillo, Maria Serrano Cuerva, Marta Sebastián, Manuel Dall’Osto, Rafel Simó, Dolors Vaqué (2020). Assessing Viral Abundance and Community Composition in Four Contrasting Regions of the Southern Ocean. Life, 10, 107.

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Weiyi Tang, Elena Cerdán García, Hugo Berthelot, Despo Polyviou, Seaver Wang, Alison Baylay, Hannah Whitby, Hélène Planquette, Matthew Mowlem, Julie Robidart, Nicolas Cassar (2020). New insights into the distributions of nitrogen fixation and diazotrophs revealed by high-resolution sensing and sampling methods. The ISME journal, 14, 2514–2526.

URL

Alison E Murray, John Freudenstein, Simonetta Gribaldo, Roland Hatzenpichler, Philip Hugenholtz, Peter Kämpfer, Konstantinos T Konstantinidis, Christopher E Lane, R Thane Papke, Donovan H Parks, Ramon Rossello-Mora, Matthew B Stott, Iain C Sutcliffe, J Cameron Thrash, Stephanus N Venter, William B Whitman, Silvia G. Acinas, Rudolf I Amann, Karthik Anantharaman, Jean Armengaud, Brett J Baker, Roman a Barco, Helge B Bode, Eric S Boyd, Carrie L Brady, Paul Carini, Patrick S G Chain, Daniel R Colman, Kristen M DeAngelis, Maria Asuncion De Los Rios, Paulina Estrada-De Los Santos, Christopher a Dunlap, Jonathan a Eisen, David Emerson, Thijs J G Ettema, Damien Eveillard, Peter R Girguis, Ute Hentschel, James T Hollibaugh, Laura a Hug, William P Inskeep, Elena P Ivanova, Hans-Peter Klenk, Wen-Jun Li, Karen G Lloyd, Frank E Löffler, Thulani P Makhalanyane, Duane P Moser, Takuro Nunoura, Marike Palmer, Victor Parro, Carlos Pedrós-Alió, Alexander J Probst, Theo H M Smits, Andrew D Steen, Emma T Steenkamp, Anja Spang, Frank J Stewart, James M Tiedje, Peter Vandamme, Michael Wagner, Feng-Ping Wang, Pablo Yarza, Brian P Hedlund, Anna-Louise Reysenbach (2020). Roadmap for naming uncultivated Archaea and Bacteria. Nature Microbiology, 5, 987-994.

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Maria Montserrat Sala, Clara Ruiz-González, Encarna Borrull, Iñigo Azúa, Zuriñe Baña, Begoña Ayo, X Antón Álvarez-Salgado, Josep M. Gasol, Carlos M Duarte (2020). Prokaryotic Capability to Use Organic Substrates Across the Global Tropical and Subtropical Ocean. Frontiers in Microbiology, 11, 918.

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Clara Ruiz-González, Mireia Mestre, Marta Estrada, Marta Sebastián, Guillem Salazar, Susana Agustí, Enrique Moreno-Ostos, Isabel Reche, Xosé Antón Álvarez-Salgado, Xosé Anxelu G Morán, Carlos M Duarte, Maria Montserrat Sala, Josep M. Gasol (2020). Major imprint of surface plankton on deep ocean prokaryotic structure and activity. Molecular Ecology, 29, 1820-1838.

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Pablo Rodríguez-Ros, Pau Cortés, Charlotte Mary Robinson, Sdena Nunes, Christel Hassler, Sarah-Jeanne Royer, Marta Estrada, Maria Montserrat Sala, Rafel Simó (2020). Distribution and Drivers of Marine Isoprene Concentration across the Southern Ocean. Atmosphere, 11, 556.

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Aleix Obiol, Caterina R. Giner, Pablo Sánchez, Carlos M Duarte, Silvia G. Acinas, Ramon Massana (2020). A metagenomic assessment of microbial eukaryotic diversity in the global ocean. Molecular Ecology Resources, 20, 718-731.

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Caterina R. Giner, Massimo C. Pernice, Vanessa Balagué, Carlos M Duarte, Josep M. Gasol, Ramiro Logares, Ramon Massana (2020). Marked changes in diversity and relative activity of picoeukaryotes with depth in the world ocean. The ISME Journal, 14, 437-449.

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Yaiza M. Castillo, Marta Sebastián, Irene Forn, Nigel Grimsley, Sheree Yau, Cristina Moraru, Dolors Vaqué (2020). Visualization of Viral Infection Dynamics in a Unicellular Eukaryote and Quantification of Viral Production Using Virus Fluorescence in situ Hybridization. 11, 1559.

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Mario López-Pérez, Jose M. Haro-Moreno, Felipe H. Coutinho, Manuel Martinez-Garcia, Francisco Rodriguez-Valera (2020). The Evolutionary Success of the Marine Bacterium SAR11 Analyzed through a Metagenomic Perspective. mSystems, 5, e00605--20.

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Clara Ruiz‐González, Maria Carolina Garcia‐Chaves, Isabel Ferrera, Juan Pablo Niño‐García, Paul A. Del Giorgio (2020). Taxonomic differences shape the responses of freshwater aerobic anoxygenic phototrophic bacterial communities to light and predation. Molecular Ecology, 29, 1267--1283.

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Paula C.J. Reis, Clara Ruiz-González, Sophie Crevecoeur, Cynthia Soued, Yves T. Prairie (2020). Rapid shifts in methanotrophic bacterial communities mitigate methane emissions from a tropical hydropower reservoir and its downstream river. Science of The Total Environment, 748, 141374.

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Paula C. J. Reis, Shoji D. Thottathil, Clara Ruiz‐González, Yves T. Prairie (2020). Niche separation within aerobic methanotrophic bacteria across lakes and its link to methane oxidation rates. Environmental Microbiology, 22, 738--751.

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Felipe H. Coutinho, P. J. Cabello-Yeves, R. Gonzalez-Serrano, R. Rosselli, M. López-Pérez, T. I. Zemskaya, A. S. Zakharenko, V. G. Ivanov, F. Rodriguez-Valera (2020). New viral biogeochemical roles revealed through metagenomic analysis of Lake Baikal. Microbiome, 8, 163.

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Diogo A. Tschoeke, Felipe H. Coutinho, Luciana Leomil, Giselle Cavalcanti, Bruno S. Silva, Gizele D. Garcia, Leandro Candeia Dos Anjos, Larissa Borges Nascimento, Luciane S. Moreira, Koko Otsuki, Renato C. Cordeiro, Carlos E. Rezende, Fabiano L. Thompson, Cristiane C. Thompson (2020). New bacterial and archaeal lineages discovered in organic rich sediments of a large tropical Bay. Marine Genomics, 54, 100789.

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Elena Cerro-Gálvez, Jose L. Roscales, Begoña Jiménez, Maria Montserrat Sala, Jordi Dachs, Maria Vila-Costa (2020). Microbial responses to perfluoroalkyl substances and perfluorooctanesulfonate (PFOS) desulfurization in the Antarctic marine environment. 171, 115434.

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Hans-Peter Grossart, Ramon Massana, Katherine D. McMahon, David A. Walsh (2020). Linking metagenomics to aquatic microbial ecology and biogeochemical cycles. 65,

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Cynthia B. Silveira, Felipe H. Coutinho, Giselle S. Cavalcanti, Sean Benler, Michael P. Doane, Elizabeth A. Dinsdale, Robert A. Edwards, Ronaldo B. Francini-Filho, Cristiane C. Thompson, Antoni Luque, Forest L. Rohwer, Fabiano Thompson (2020). Genomic and ecological attributes of marine bacteriophages encoding bacterial virulence genes. BMC Genomics, 21, 126.

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Aurelie Labarre, Aleix Obiol, Susanne Wilken, Irene Forn, Ramon Massana (2020). Expression of genes involved in phagocytosis in uncultured heterotrophic flagellates. 65,

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Marta Royo-Llonch, Pablo Sánchez, José M González, Carlos Pedrós-Alió, Silvia G Acinas (2020). Ecological and functional capabilities of an uncultured Kordia sp.. Systematic and Applied Microbiology, 43, 126045.

Cite

Marta Royo-Llonch, Pablo Sánchez, José M. González, Carlos Pedrós-Alió, Silvia G. Acinas (2020). Ecological and functional capabilities of an uncultured Kordia sp.. Systematic and Applied Microbiology, 43, 126045.

Cite URL

Jose M Haro-Moreno, Felipe H. Coutinho, Asier Zaragoza-Solas, Antonio Picazo, Salvador Almagro-Moreno, Mario López-Pérez (2020). Dysbiosis in marine aquaculture revealed through microbiome analysis: reverse ecology for environmental sustainability. FEMS Microbiology Ecology, 96, fiaa218.

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Ramiro Logares, Ina M. Deutschmann, Pedro C. Junger, Caterina R. Giner, Anders K. Krabberød, Thomas S. B. Schmidt, Laura Rubinat-Ripoll, Mireia Mestre, Guillem Salazar, Clara Ruiz-González, Marta Sebastián, Colomban De Vargas, Silvia G. Acinas, Carlos M. Duarte, Josep M. Gasol, Ramon Massana (2020). Disentangling the mechanisms shaping the surface ocean microbiota. Microbiome, 8, 55.

Cite URL

Oriol Canals, Aleix Obiol, Imer Muhovic, Dolors Vaqué, Ramon Massana (2020). Ciliate diversity and distribution across horizontal and vertical scales in the open ocean. 29, 2824--2839.

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Thomas a Richards, Ramon Massana, Stefano Pagliara, Neil Hall (2019). Single cell ecology. Philosophical Transactions of the Royal Society B: Biological Sciences, 374, 20190076.

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Marina Zamanillo, Eva Ortega-Retuerta, Sdena Nunes, Marta Estrada, Maria Montserrat Sala, Sarah-Jeanne Royer, Daffne C López-Sandoval, Mikhail Emelianov, Dolors Vaqué, Cèlia Marrasé, Rafel Simó (2019). Distribution of transparent exopolymer particles (TEP) in distinct regions of the Southern Ocean. Science of The Total Environment, 691, 736-748.

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Javier del Campo, Thierry J Heger, Raquel Rodríguez-Martínez, Alexandra Z Worden, Thomas a Richards, Ramon Massana, Patrick J Keeling (2019). Assessing the Diversity and Distribution of Apicomplexans in Host and Free-Living Environments Using High-Throughput Amplicon Data and a Phylogenetically Informed Reference Framework. Frontiers in Microbiology, 10, 2373.

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Alejandra Ortega, Nathan R Geraldi, Intikhab Alam, Allan a Kamau, Silvia G. Acinas, Ramiro Logares, Josep M. Gasol, Ramon Massana, Dorte Krause-Jensen, Carlos M Duarte (2019). Important contribution of macroalgae to oceanic carbon sequestration. Nature Geoscience, 12, 748-754.

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Enrique Flores, Sergio Arévalo, Mireia Burnat (2019). Cyanophycin and arginine metabolism in cyanobacteria. Algal Research, 42, 101577.

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Maria Montserrat Sala, Judith Piontek, Sonja Endres, Anna M Romani, Sonya Dyhrman, Andrew D Steen (2019). Editorial: Extracellular Enzymes in Aquatic Environments: Exploring the Link Between Genomic Potential and Biogeochemical Consequences. Frontiers in Microbiology, 10, 1463.

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Cristina Díez-Vives, Shaun Nielsen, Pablo Sánchez, Oswaldo Palenzuela, Isabel Ferrera, Marta Sebastián, Carlos Pedrós-Alió, Josep M. Gasol, Silvia G. Acinas (2019). Delineation of ecologically distinct units of marine Bacteroidetes in the Northwestern Mediterranean Sea. Molecular Ecology, 28, 2846-2859.

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Ann C Gregory, Ahmed a Zayed, Nádia Conceição-Neto, Ben Temperton, Ben Bolduc, Adriana Alberti, Mathieu Ardyna, Ksenia Arkhipova, Margaux Carmichael, Corinne Cruaud, Céline Dimier, Guillermo Domínguez-Huerta, Joannie Ferland, Stefanie Kandels, Yunxiao Liu, Claudie Marec, Marc Picheral, Sergey Pisarev, Julie Poulain, Jean-Éric Tremblay, Dean Vik, Alexander I Culley, Bas E Dutilh, Simon Roux, Silvia G. Acinas, Marcel Babin, Peer Bork, Emmanuel Boss, Chris Bowler, Guy Cochrane, Colomban De Vargas, Michael Follows, Gabriel Gorsky, Nigel Grimsley, Lionel Guidi, Pascal Hingamp, Daniele Iudicone, Olivier Jaillon, Stefanie Kandels-Lewis, Lee Karp-Boss, Eric Karsenti, Fabrice Not, Hiroyuki Ogata, Stéphane Pesant, Nicole Poulton, Jeroen Raes, Christian Sardet, Sabrina Speich, Lars Stemmann, Matthew B Sullivan, Shinichi Sunagawa, Patrick Wincker (2019). Marine DNA Viral Macro- and Microdiversity from Pole to Pole. Cell, 177, 1109-1123.e14.

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Michael E Sieracki, Nicole J Poulton, Olivier Jaillon, Patrick Wincker, Colomban De Vargas, Laura Rubinat-Ripoll, Ramunas Stepanauskas, Ramiro Logares, Ramon Massana (2019). Single cell genomics yields a wide diversity of small planktonic protists across major ocean ecosystems. Scientific Reports, 9, 6025.

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Clara Ruiz-González, Ramiro Logares, Marta Sebastián, Mireia Mestre, Raquel Rodríguez-Martínez, Martí Galí, Maria Montserrat Sala, Silvia G. Acinas, Carlos M Duarte, Josep M. Gasol (2019). Higher contribution of globally rare bacterial taxa reflects environmental transitions across the surface ocean. Molecular Ecology, 28, 1930-1945.

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Marta Sebastián, Margarita Estrany, Clara Ruiz-González, Irene Forn, Maria Montserrat Sala, Josep M. Gasol, Celia Marrasé (2019). High Growth Potential of Long-Term Starved Deep Ocean Opportunistic Heterotrophic Bacteria. Frontiers in Microbiology, 10, 760.

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Clare Davis, Maeve Lohan, Robyn Tuerena, Elena Cerdán García, Malcom Woodward, Alessandro Tagliabue, Claire Mahaffey (2019). Diurnal variability in alkaline phosphatase activity and the potential role of zooplankton. Limnology and Oceanography Letters, 4, 71-78.

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Dolors Vaqué, Elena Lara, Jesús M Arrieta, Johnna Holding, Elisabet L. Sà, Iris E Hendriks, Alexandra Coello-Camba, Marta Alvarez, Susana Agustí, Paul F Wassmann, Carlos M Duarte (2019). Warming and CO2 Enhance Arctic Heterotrophic Microbial Activity. Frontiers in Microbiology, 10, 494.

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Marina Zamanillo, Eva Ortega-Retuerta, Sdena Nunes, Pablo Rodríguez-Ros, Manuel Dall'Osto, Marta Estrada, Maria Montserrat Sala, Rafel Simó (2019). Main drivers of transparent exopolymer particle distribution across the surface Atlantic Ocean. Biogeosciences, 16, 733-749.

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Marta Sebastián, Josep M. Gasol (2019). Visualization is crucial for understanding microbial processes in the ocean. Philosophical Transactions of the Royal Society B: Biological Sciences, 374, 20190083.

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Fran Cornejo-Castillo, Maria Del Carmen Muñoz-Marín, Kendra A. Turk-Kubo, Marta Royo-Llonch, Hanna Farnelid, Silvia G. Acinas, Jonathan P. Zehr (2019). UCYN-A3, a newly characterized open ocean sublineage of the symbiotic N2-fixing cyanobacterium Candidatus Atelocyanobacterium thalassa. Environmental Microbiology, 21, 111-124.

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Felipe H. Coutinho, Riccardo Rosselli, Francisco Rodríguez-Valera (2019). Trends of Microdiversity Reveal Depth-Dependent Evolutionary Strategies of Viruses in the Mediterranean. mSystems, 4, 10.1128/msystems.00554--19.

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F. A. Bastiaan Von Meijenfeldt, Ksenia Arkhipova, Diego D. Cambuy, Felipe H. Coutinho, Bas E. Dutilh (2019). Robust taxonomic classification of uncharted microbial sequences and bins with CAT and BAT. Genome Biology, 20, 217.

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Sina M. Adl, David Bass, Christopher E. Lane, Julius Lukeš, Conrad L. Schoch, Alexey Smirnov, Sabine Agatha, Cedric Berney, Matthew W. Brown, Fabien Burki, Paco Cárdenas, Ivan Čepička, Lyudmila Chistyakova, Javier del Campo, Micah Dunthorn, Bente Edvardsen, Yana Eglit, Laure Guillou, Vladimír Hampl, Aaron A. Heiss, Mona Hoppenrath, Timothy Y. James, Anna Karnkowska, Sergey Karpov, Eunsoo Kim, Martin Kolisko, Alexander Kudryavtsev, Daniel J.G. Lahr, Enrique Lara, Line Le Gall, Denis H. Lynn, David G. Mann, Ramon Massana, Edward A.D. Mitchell, Christine Morrow, Jong Soo Park, Jan W. Pawlowski, Martha J. Powell, Daniel J. Richter, Sonja Rueckert, Lora Shadwick, Satoshi Shimano, Frederick W. Spiegel, Guifré Torruella, Noha Youssef, Vasily Zlatogursky, Qianqian Zhang (2019). Revisions to the Classification, Nomenclature, and Diversity of Eukaryotes. 66, 4--119.

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Felipe H. Coutinho, C. B. Silveira, G. B. Gregoracci, C. C. Thompson, R. A. Edwards, C. P. D. Brussaard, B. E. Dutilh, F. L. Thompson (2019). Reply to: Caution in inferring viral strategies from abundance correlations in marine metagenomes. Nature Communications, 10, 502.

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Caterina R. Giner, Vanessa Balagué, Anders K. Krabberød, Isabel Ferrera, Albert Reñé, Esther Garcés, Josep M. Gasol, Ramiro Logares, Ramon Massana (2019). Quantifying long-term recurrence in planktonic microbial eukaryotes. 28, 923--935.

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Paula Huber, Fran Cornejo-Castillo, Isabel Ferrera, Pablo Sánchez, Ramiro Logares, Sebastián Metz, Vanessa Balagué, Silvia G. Acinas, Josep M. Gasol, Fernando Unrein (2019). Primer design for an accurate view of picocyanobacterial community structure by using high-throughput sequencing. Applied and Environmental Microbiology, 85, 1--17.

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Elena Cerro-Gálvez, Maria Montserrat Sala, Cèlia Marrasé, Josep M. Gasol, Jordi Dachs, Maria Vila-Costa (2019). Modulation of microbial growth and enzymatic activities in the marine environment due to exposure to organic contaminants of emerging concern and hydrocarbons. 678, 486--498.

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Felipe H. Coutinho, C.C. Thompson, A.S. Cabral, R. Paranhos, B.E. Dutilh, F.L. Thompson (2019). Modelling the influence of environmental parameters over marine planktonic microbial communities using artificial neural networks. Science of The Total Environment, 677, 205--214.

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Maria Vila-Costa, Marta Sebastián, Mariana Pizarro, Elena Cerro-Gálvez, Daniel Lundin, Josep M. Gasol, Jordi Dachs (2019). Microbial consumption of organophosphate esters in seawater under phosphorus limited conditions. Scientific Reports, 9, 233.

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Adrià Auladell, Pablo Sánchez, Olga Sánchez, Josep M. Gasol, Isabel Ferrera (2019). Long-term seasonal and interannual variability of marine aerobic anoxygenic photoheterotrophic bacteria. 13, 1975--1987.

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Sophie Crevecoeur, Clara Ruiz‐González, Yves T. Prairie, Paul A. Del Giorgio (2019). Large‐scale biogeography and environmental regulation of methanotrophic bacteria across boreal inland waters. Molecular Ecology, 28, 4181--4196.

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Felipe H. Coutinho, Diogo Antonio Tschoeke, Maysa Mandetta Clementino, Cristiane Carneiro Thompson, Fabiano Lopes Thompson (2019). Genomic basis of antibiotic resistance in Vibrio parahaemolyticus strain JPA1. Memórias do Instituto Oswaldo Cruz, 114, e190053.

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Guillem Salazar, Lucas Paoli, Adriana Alberti, Jaime Huerta-Cepas, Hans-Joachim Ruscheweyh, Miguelangel Cuenca, Christopher M. Field, Luis Pedro Coelho, Corinne Cruaud, Stefan Engelen, Ann C. Gregory, Karine Labadie, Claudie Marec, Eric Pelletier, Marta Royo-Llonch, Simon Roux, Pablo Sánchez, Hideya Uehara, Ahmed A. Zayed, Georg Zeller, Margaux Carmichael, Céline Dimier, Joannie Ferland, Stefanie Kandels, Marc Picheral, Sergey Pisarev, Julie Poulain, Silvia G. Acinas, Marcel Babin, Peer Bork, Emmanuel Boss, Chris Bowler, Guy Cochrane, Colomban De Vargas, Michael Follows, Gabriel Gorsky, Nigel Grimsley, Lionel Guidi, Pascal Hingamp, Daniele Iudicone, Olivier Jaillon, Stefanie Kandels-Lewis, Lee Karp-Boss, Eric Karsenti, Fabrice Not, Hiroyuki Ogata, Stephane Pesant, Nicole Poulton, Jeroen Raes, Christian Sardet, Sabrina Speich, Lars Stemmann, Matthew B. Sullivan, Shinichi Sunagawa, Patrick Wincker (2019). Gene Expression Changes and Community Turnover Differentially Shape the Global Ocean Metatranscriptome. Cell, 179, 1068--1083.

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Maria Montserrat Sala, Judith Piontek, Sonja Endres, Anna Maria Romani, Sonya Dyhrman, Andrew Decker Steen (2019). Extracellular Enzymes in Aquatic Environments: Exploring the Link Between Genomic Potential and Biogeochemical Consequences. Frontiers Media SA,

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Luigi Caputi, Quentin Carradec, Damien Eveillard, Amos Kirilovsky, Eric Pelletier, Juan J. Pierella Karlusich, Fabio Rocha Jimenez Vieira, Emilie Villar, Samuel Chaffron, Shruti Malviya, Eleonora Scalco, Silvia G. Acinas, Adriana Alberti, Jean-Marc Aury, Anne-Sophie Benoiston, Alexis Bertrand, Tristan Biard, Lucie Bittner, Martine Boccara, Jennifer R. Brum, Christophe Brunet, Greta Busseni, Anna Carratalà, Hervé Claustre, Luis Pedro Coelho, Sébastien Colin, Salvatore D'Aniello, Corinne Da Silva, Marianna Del Core, Hugo Doré, Stéphane Gasparini, Florian Kokoszka, Jean-Louis Jamet, Christophe Lejeusne, Cyrille Lepoivre, Magali Lescot, Gipsi Lima-Mendez, Fabien Lombard, Julius Lukeš, Nicolas Maillet, Mohammed-Amin Madoui, Elodie Martinez, Maria Grazia Mazzocchi, Mario B. Néou, Javier Paz-Yepes, Julie Poulain, Simon Ramondenc, Jean-Baptiste Romagnan, Simon Roux, Daniela Salvagio Manta, Remo Sanges, Sabrina Speich, Mario Sprovieri, Shinichi Sunagawa, Vincent Taillandier, Atsuko Tanaka, Leila Tirichine, Camille Trottier, Julia Uitz, Alaguraj Veluchamy, Jana Veselá, Flora Vincent, Sheree Yau, Stefanie Kandels-Lewis, Sarah Searson, Céline Dimier, Marc Picheral, Tara Oceans Coordinators, Peer Bork, Emmanuel Boss, Colomban De Vargas, Michael J. Follows, Nigel Grimsley, Lionel Guidi, Pascal Hingamp, Eric Karsenti, Paolo Sordino, Lars Stemmann, Matthew B. Sullivan, Alessandro Tagliabue, Adriana Zingone, Laurence Garczarek, Fabrizio D'Ortenzio, Pierre Testor, Fabrice Not, Maurizio Ribera D'Alcalà, Patrick Wincker, Chris Bowler, Daniele Iudicone (2019). Community-Level Responses to Iron Availability in Open Ocean Plankton Ecosystems. 33, 391--419.

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Felipe H. Coutinho, R. A. Edwards, F. Rodríguez-Valera (2019). Charting the diversity of uncultured viruses of Archaea and Bacteria. BMC Biology, 17, 109.

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Yaiza M. Castillo, Jean-François Mangot, Luiz Felipe Benites, Ramiro Logares, Megumi Kuronishi, Hiroyuki Ogata, Olivier Jaillon, Ramon Massana, Marta Sebastián, Dolors Vaqué (2019). Assessing the viral content of uncultured picoeukaryotes in the global-ocean by single cell genomics. 28, 4272--4289.

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Jose Luis Otero-Ferrer, Pedro Cermeño, Antonio Bode, Bieito Fernández-Castro, Josep M. Gasol, Xosé Anxelu G Morán, Emilio Marañon, Victor Moreira-Coello, Marta M Varela, Marina Villamaña, Beatriz Mouriño-Carballido (2018). Factors controlling the community structure of picoplankton in contrasting marine environments. Biogeosciences, 15, 6199-6220.

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Jean-François Mangot, Irene Forn, Aleix Obiol, Ramon Massana (2018). Constant abundances of ubiquitous uncultured protists in the open sea assessed by automated microscopy. Environmental Microbiology, 20, 3876-3889.

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Javier del Campo, Martin Kolisko, Vittorio Boscaro, Luciana F Santoferrara, Serafim Nenarokov, Ramon Massana, Laure Guillou, Alastair Simpson, Cedric Berney, Colomban De Vargas, Matthew W Brown, Patrick J Keeling, Laura Wegener Parfrey (2018). EukRef: Phylogenetic curation of ribosomal RNA to enhance understanding of eukaryotic diversity and distribution. PLOS Biology, 16, e2005849.

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C. P. Suffridge, Laura Gómez-Consarnau, D. R. Monteverde, L. Cutter, Javier Arístegui, Xosé Antón Álvarez-Salgado, Josep M. Gasol, S. A. Sañudo-Wilhelmy (2018). B Vitamins and Their Congeners as Potential Drivers of Microbial Community Composition in an Oligotrophic Marine Ecosystem. Journal of Geophysical Research: Biogeosciences, 123, 2890-2907.

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Eva Ortega-Retuerta, Cèlia Marrasé, Ana Muñoz-Fernández, Maria Montserrat Sala, Rafel Simó, Josep M. Gasol (2018). Seasonal dynamics of transparent exopolymer particles (TEP) and their drivers in the coastal NW Mediterranean Sea. Science of The Total Environment, 631-632, 180-190.

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David López-Escardó, Jordi Paps, Colomban De Vargas, Ramon Massana, Iñaki Ruiz-Trillo, Javier del Campo (2018). Metabarcoding analysis on European coastal samples reveals new molecular metazoan diversity. Scientific Reports, 8, 9106.

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MohammadMatin Hanifzadeh, Elena Cerdán García, Sridhar Viamajala (2018). Production of lipid and carbohydrate from microalgae without compromising biomass productivities: Role of Ca and Mg. Renewable Energy, 127, 989-997.

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Sdena Nunes, Mikel Latasa, Josep M. Gasol, Marta Estrada (2018). Seasonal and interannual variability of phytoplankton community structure in a Mediterranean coastal site. Marine Ecology Progress Series, 592, 57-75.

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Marta Sebastián, Jean-Christophe Auguet, Claudia Ximena Restrepo-Ortiz, Maria Montserrat Sala, Celia Marrasé, Josep M. Gasol (2018). Deep ocean prokaryotic communities are remarkably malleable when facing long-term starvation. Environmental Microbiology, 20, 713-723.

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Iris Fernández-Ruiz, Felipe H. Coutinho, Francisco Rodriguez-Valera (2018). Thousands of Novel Endolysins Discovered in Uncultured Phage Genomes. Frontiers in Microbiology, 9, 1033.

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Clara Ruiz-González, Esther Archambault, Isabelle Laforest-Lapointe, Paul a Del Giorgio, Steven W Kembel, Christian Messier, Charles a Nock, Beatrix E Beisner (2018). Soils associated to different tree communities do not elicit predictable responses in lake bacterial community structure and function. FEMS Microbiology Ecology, 94, fiy115.

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Mireia Mestre, Clara Ruiz-González, Ramiro Logares, Carlos M. Duarte, Josep M. Gasol, Maria Montserrat Sala (2018). Sinking particles promote vertical connectivity in the ocean microbiome. 115,

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Yoann Seeleuthner, Samuel Mondy, Vincent Lombard, Quentin Carradec, Eric Pelletier, Marc Wessner, Jade Leconte, Jean-François Mangot, Julie Poulain, Karine Labadie, Ramiro Logares, Shinichi Sunagawa, Véronique De Berardinis, Marcel Salanoubat, Céline Dimier, Stefanie Kandels-Lewis, Marc Picheral, Sarah Searson, Tara Oceans Coordinators, Silvia G. Acinas, Emmanuel Boss, Michael Follows, Gabriel Gorsky, Nigel Grimsley, Lee Karp-Boss, Uros Krzic, Fabrice Not, Hiroyuki Ogata, Jeroen Raes, Emmanuel G Reynaud, Christian Sardet, Sabrina Speich, Lars Stemmann, Didier Velayoudon, Jean Weissenbach, Stephane Pesant, Nicole Poulton, Ramunas Stepanauskas, Peer Bork, Chris Bowler, Pascal Hingamp, Matthew B Sullivan, Daniele Iudicone, Ramon Massana, Jean-Marc Aury, Bernard Henrissat, Eric Karsenti, Olivier Jaillon, Mike Sieracki, Colomban De Vargas, Patrick Wincker (2018). Single-cell genomics of multiple uncultured stramenopiles reveals underestimated functional diversity across oceans. Nature Communications, 9, 310.

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Jean Baptiste Ledoux, Maša Frleta-Valić, Silvija Kipson, Agostinho Antunes, Emma Cebrian, Cristina Linares, Pablo Sánchez, Raphael Leblois, Joaquim Garrabou (2018). Postglacial range expansion shaped the spatial genetic structure in a marine habitat-forming species: Implications for conservation plans in the Eastern Adriatic Sea. Journal of Biogeography, 45, 2645--2657.

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A Bellaaj Zouari, M Bel Hassen, V Balagué, E Sahli, My Ben Kacem, F Akrout, A Hamza, R Massana (2018). Picoeukaryotic diversity in the Gulf of Gabès: variability patterns and relationships to nutrients and water masses. 81, 37--53.

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Oriol Canals, Ramon Massana, Joan Lluís Riera, Vanessa Balagué, Humbert Salvadó (2018). Microeukaryote community in a partial nitritation reactor prior to anammox and an insight into the potential of ciliates as performance bioindicators. 43, 3--12.

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Felipe H. Coutinho, Gustavo Bueno Gregoracci, Juline Marta Walter, Cristiane Carneiro Thompson, Fabiano L. Thompson (2018). Metagenomics Sheds Light on the Ecology of Marine Microbes and Their Viruses. Trends in Microbiology, 26, 955--965.

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Pedro J. Cabello-Yeves, Tamara I. Zemskaya, Riccardo Rosselli, Felipe H. Coutinho, Alexandra S. Zakharenko, Vadim v. Blinov, Francisco Rodriguez-Valera (2018). Genomes of Novel Microbial Lineages Assembled from the Sub-Ice Waters of Lake Baikal. Applied and Environmental Microbiology, 84, e02132--17.

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Pedro J. Cabello‐Yeves, Antonio Picazo, Antonio Camacho, Cristiana Callieri, Riccardo Rosselli, Juan J. Roda‐Garcia, Felipe H. Coutinho, Francisco Rodriguez‐Valera (2018). Ecological and genomic features of two widespread freshwater picocyanobacteria. Environmental Microbiology, 20, 3757--3771.

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Mireia Mestre, Isabel Ferrera, Encarna Borrull, Eva Ortega-Retuerta, Susan Mbedi, Hans-Peter Grossart, Josep M. Gasol, Maria Montserrat Sala (2017). Spatial variability of marine bacterial and archaeal communities along the particulate matter continuum. Molecular Ecology, 26, 6827-6840.

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Isabel Ferrera, Olga Sánchez, Eva Kolářová, Michal Koblížek, Josep M. Gasol (2017). Light enhances the growth rates of natural populations of aerobic anoxygenic phototrophic bacteria. The ISME Journal, 11, 2391-2393.

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Xosé Anxelu G Morán, Josep M. Gasol, Massimo C. Pernice, Jean-François Mangot, Ramon Massana, Elena Lara, Dolors Vaqué, Carlos M Duarte (2017). Temperature regulation of marine heterotrophic prokaryotes increases latitudinally as a breach between bottom-up and top-down controls. Global Change Biology, 23, 3956-3964.

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Lara S Garcia-Corral, Johnna M Holding, Paloma Carrillo-De-Albornoz, Alexandra Steckbauer, María Pérez-Lorenzo, Nuria Navarro, Pablo Serret, Josep M. Gasol, Xosé Anxelu G Morán, Marta Estrada, Eugenio Fraile-Nuez, Verónica Benítez-Barrios, Susana Agusti, Carlos M Duarte (2017). Temperature dependence of plankton community metabolism in the subtropical and tropical oceans. Global Biogeochemical Cycles, 31, 1141-1154.

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Marta Royo-Llonch, Isabel Ferrera, Fran Cornejo-Castillo, Pablo Sánchez, Guillem Salazar, Ramunas Stepanauskas, José M González, Michael E Sieracki, Sabrina Speich, Lars Stemmann, Carlos Pedrós-Alió, Silvia G. Acinas (2017). Exploring Microdiversity in Novel Kordia sp. (Bacteroidetes) with Proteorhodopsin from the Tropical Indian Ocean via Single Amplified Genomes. Frontiers in Microbiology, 8, 1317.

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Francisco Martinez-Hernandez, Oscar Fornas, Monica Lluesma Gomez, Benjamin Bolduc, Maria Jose De La Cruz Peña, Joaquín Martínez Martínez, Josefa Anton, Josep M. Gasol, Riccardo Rosselli, Francisco Rodriguez-Valera, Matthew B Sullivan, Silvia G. Acinas, Manuel Martinez-Garcia (2017). Single-virus genomics reveals hidden cosmopolitan and abundant viruses. Nature Communications, 8, 15892.

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Nathalie Joli, Adam Monier, Ramiro Logares, Connie Lovejoy (2017). Seasonal patterns in Arctic prasinophytes and inferred ecology of Bathycoccus unveiled in an Arctic winter metagenome. The ISME Journal, 11, 1372-1385.

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Olga Sánchez, Michal Koblížek, Josep M. Gasol, Isabel Ferrera (2017). Effects of grazing, phosphorus and light on the growth rates of major bacterioplankton taxa in the coastal NW Mediterranean. Environmental Microbiology Reports, 9, 300-309.

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Mireia Mestre, Encarna Borrull, Maria Montserrat Sala, Josep M. Gasol (2017). Patterns of bacterial diversity in the marine planktonic particulate matter continuum. The ISME Journal, 11, 999-1010.

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Paula Huber, Nadia Diovisalvi, Marcela Ferraro, Sebastián Metz, Leonardo Lagomarsino, María Eugenia Llames, Marta Royo-Llonch, José Bustingorry, Roberto Escaray, Silvia G. Acinas, Josep M. Gasol, Fernando Unrein (2017). Phenotypic plasticity in freshwater picocyanobacteria. Environmental Microbiology, 19, 1120-1133.

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Anders K. Krabberød, Marit F. M. Bjorbækmo, Kamran Shalchian-Tabrizi, Ramiro Logares (2017). Exploring the oceanic microeukaryotic interactome with metaomics approaches. Aquatic Microbial Ecology, 79, 1-12.

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Mikel Latasa, Ana María Cabello, Xosé Anxelu G Morán, Ramon Massana, Renate Scharek (2017). Distribution of phytoplankton groups within the deep chlorophyll maximum. Limnology and Oceanography, 62, 665-685.

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Fran L. Aparicio, Mar Nieto-Cid, Eva Calvo, Carles Pelejero, Àngel López-Sanz, Josep Pascual, Jordi Salat, Elvia D. Sánchez-Pérez, Patricia De La Fuente, Josep M. Gasol, Cèlia Marrasé (2017). Wind-induced changes in the dynamics of fluorescent organic matter in the coastal NW Mediterranean. 609, 1001--1012.

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Dolors Vaqué, Julia A. Boras, Francesc Torrent-Llagostera, Susana Agustí, Jesús M. Arrieta, Elena Lara, Yaiza M. Castillo, Carlos M. Duarte, Maria Montserrat Sala (2017). Viruses and Protists Induced-mortality of Prokaryotes around the Antarctic Peninsula during the Austral Summer. 8,

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Bruno S. De O. Silva, Felipe H. Coutinho, Gustavo B. Gregoracci, Luciana Leomil, Louisi S. De Oliveira, Adriana Fróes, Diogo Tschoeke, Ana Carolina Soares, Anderson S. Cabral, Nicholas D. Ward, Jeffrey E. Richey, Alex v. Krusche, Patricia L. Yager, Carlos Eduardo De Rezende, Cristiane C. Thompson, Fabiano L. Thompson (2017). Virioplankton Assemblage Structure in the Lower River and Ocean Continuum of the Amazon. mSphere, 2, e00366--17.

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Adriana Alberti, Julie Poulain, Stefan Engelen, Karine Labadie, Sarah Romac, Isabel Ferrera, Guillaume Albini, Jean-Marc Aury, Caroline Belser, Alexis Bertrand, Corinne Cruaud, Corinne Da Silva, Carole Dossat, Frédérick Gavory, Shahinaz Gas, Julie Guy, Maud Haquelle, E'krame Jacoby, Arnaud Lemainque, Eric Pelletier, Gaëlle Samson, Mark Wessner, Genoscope Technical Team, Pascal Bazire, Odette Beluche, Laurie Bertrand, Marielle Besnard-Gonnet, Isabelle Bordelais, Magali Boutard, Maria Dubois, Corinne Dumont, Evelyne Ettedgui, Patricia Fernandez, Espérance Garcia, Nathalie Giordanenco Aiach, Thomas Guerin, Chadia Hamon, Elodie Brun, Sandrine Lebled, Patricia Lenoble, Claudine Louesse, Eric Mahieu, Barbara Mairey, Nathalie Martins, Catherine Megret, Claire Milani, Jacqueline Muanga, Céline Orvain, Emilie Payen, Peggy Perroud, Emmanuelle Petit, Dominique Robert, Murielle Ronsin, Benoit Vacherie, Marta Royo-Llonch, Fran Cornejo-Castillo, Ramiro Logares, Beatriz Fernández-Gómez, Guy Cochrane, Clara Amid, Petra Ten Hoopen, Elodie Desgranges, Nicole Poulton, Ramunas Stepanauskas, Jennifer R. Brum, Melissa B. Duhaime, Bonnie T. Poulos, Bonnie L. Hurwitz, Tara Oceans Consortium Coordinators, Silvia G. Acinas, Peer Bork, Emmanuel Boss, Chris Bowler, Colomban De Vargas, Michael Follows, Gabriel Gorsky, Nigel Grimsley, Pascal Hingamp, Daniele Iudicone, Olivier Jaillon, Stefanie Kandels-Lewis, Lee Karp-Boss, Fabrice Not, Hiroyuki Ogata, Jeroen Raes, Christian Sardet, Michael E. Sieracki, Sabrina Speich, Lars Stemmann, Matthew B. Sullivan, Shinichi Sunagawa, Stéphane Pesant, Eric Karsenti, Patrick Wincker (2017). Viral to metazoan marine plankton nucleotide sequences from the Tara Oceans expedition. 4, 170093.

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Ainara Leizeaga, Margarita Estrany, Irene Forn, Marta Sebastián (2017). Using Click-Chemistry for Visualizing in Situ Changes of Translational Activity in Planktonic Marine Bacteria. Frontiers in Microbiology, 8, 2360.

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Terhi Rasilo, Ryan H.S. Hutchins, Clara Ruiz-González, Paul A. Del Giorgio (2017). Transport and transformation of soil-derived CO2, CH4 and DOC sustain CO2 supersaturation in small boreal streams. Science of The Total Environment, 579, 902--912.

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Ramon Massana (2017). Picoeukaryotes ☆. Reference Module in Life Sciences, B9780128096338130900.

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Felipe H. Coutinho, Cynthia B. Silveira, Gustavo B. Gregoracci, Cristiane C. Thompson, Robert A. Edwards, Corina P. D. Brussaard, Bas E. Dutilh, Fabiano L. Thompson (2017). Marine viruses discovered via metagenomics shed light on viral strategies throughout the oceans. Nature Communications, 8, 15955.

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Amir Mohaghegh Motlagh, Ananda S. Bhattacharjee, Felipe H. Coutinho, Bas E. Dutilh, Sherwood R. Casjens, Ramesh K. Goel (2017). Insights of Phage-Host Interaction in Hypersaline Ecosystem through Metagenomics Analyses. Frontiers in Microbiology, 8,

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Begoña Ayo, Naiara Abad, Itxaso Artolozaga, Iñigo Azua, Zuriñe Baña, Marian Unanue, Josep M. Gasol, Carlos M. Duarte, Juan Iriberri (2017). Imbalanced nutrient recycling in a warmer ocean driven by differential response of extracellular enzymatic activities. 23, 4084--4093.

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Clara Ruiz-González, Juan Pablo Niño-García, Steven W Kembel, Paul a Del Giorgio (2017). Identifying the core seed bank of a complex boreal bacterial metacommunity. The ISME Journal, 11, 2012--2021.

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Eva Ortega-Retuerta, Maria Montserrat Sala, Encarna Borrull, Mireia Mestre, Fran L. Aparicio, Rachele Gallisai, Carolina Antequera, Cèlia Marrasé, Francesc Peters, Rafel Simó, Josep M. Gasol (2017). Horizontal and Vertical Distributions of Transparent Exopolymer Particles (TEP) in the NW Mediterranean Sea Are Linked to Chlorophyll a and O2 Variability. 7,

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Juan Pablo Niño-García, Clara Ruiz-González, Paul A. Del Giorgio (2017). Exploring the Ecological Coherence between the Spatial and Temporal Patterns of Bacterioplankton in Boreal Lakes. Frontiers in Microbiology, 8, 636.

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Marta Royo-Llonch, Isabel Ferrera, Francisco M Cornejo-Castillo, Pablo Sánchez, Guillem Salazar, Ramunas Stepanauskas, José M González, Michael E Sieracki, Sabrina Speich, Lars Stemmann, Carlos Pedrós-Alió, Silvia G Acinas (2017). Exploring microdiversity in novel Kordia sp. (Bacteroidetes) with proteorhodopsin from the tropical Indian Ocean via Single Amplified Genomes. Frontiers in Microbiology, 8, 1--14.

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Joana Bondoso, Filipa Godoy-Vitorino, Vanessa Balagué, Josep M. Gasol, Jens Harder, Olga Maria Lage (2017). Epiphytic extitPlanctomycetes communities associated with three main groups of macroalgae. fiw255.

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Juline M. Walter, Felipe H. Coutinho, Bas E. Dutilh, Jean Swings, Fabiano L. Thompson, Cristiane C. Thompson (2017). Ecogenomics and Taxonomy of Cyanobacteria Phylum. Frontiers in Microbiology, 8, 2132.

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Clara Ruiz-González, Juan Pablo Niño-García, Martin Berggren, Paul A. Del Giorgio (2017). Contrasting dynamics and environmental controls of dispersed bacteria along a hydrologic gradient. Advances in Oceanography and Limnology, 8, 222--234.

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Cynthia B. Silveira, Gustavo B. Gregoracci, Felipe H. Coutinho, Genivaldo G. Z. Silva, John M. Haggerty, Louisi S. De Oliveira, Anderson S. Cabral, Carlos E. Rezende, Cristiane C. Thompson, Ronaldo B. Francini-Filho, Robert A. Edwards, Elizabeth A. Dinsdale, Fabiano L. Thompson (2017). Bacterial Community Associated with the Reef Coral Mussismilia braziliensis’s Momentum Boundary Layer over a Diel Cycle. Frontiers in Microbiology, 8, 784.

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Jean-François Mangot, Ramiro Logares, Pablo Sánchez, Fran Latorre, Yoann Seeleuthner, Samuel Mondy, Michael E Sieracki, Olivier Jaillon, Patrick Wincker, Colomban De Vargas, Ramon Massana (2017). Accessing the genomic information of unculturable oceanic picoeukaryotes by combining multiple single cells. Scientific Reports, 7, 41498.

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Wenxue Wu, Ramiro Logares, Bangqin Huang, Chih-Hao Hsieh (2017). Abundant and rare picoeukaryotic sub-communities present contrasting patterns in the epipelagic waters of marginal seas in the northwestern Pacific Ocean. Environmental Microbiology, 19, 287-300.

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M Romina Schiaffino, Enrique Lara, Leonardo D Fernández, Vanessa Balagué, David Singer, Christophe C W Seppey, Ramon Massana, Irina Izaguirre (2016). Microbial eukaryote communities exhibit robust biogeographical patterns along a gradient of Patagonian and Antarctic lakes. Environmental Microbiology, 18, 5249-5264.

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Alexis P Yelton, Silvia G. Acinas, Shinichi Sunagawa, Peer Bork, Carlos Pedrós-Alió, Sallie W Chisholm (2016). Global genetic capacity for mixotrophy in marine picocyanobacteria. The ISME Journal, 10, 2946-2957.

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Maryia Khomich, Håvard Kauserud, Ramiro Logares, Serena Rasconi, Tom Andersen (2016). Planktonic protistan communities in lakes along a large-scale environmental gradient. FEMS Microbiology Ecology, fiw231.

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Hugo Sarmento, Cédric Morana, Josep M. Gasol (2016). Bacterioplankton niche partitioning in the use of phytoplankton-derived dissolved organic carbon: quantity is more important than quality. The ISME Journal, 10, 2582-2592.

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Josep M. Gasol, Clara Cardelús, Xosé Anxelu G Morán, Vanessa Balagué, Irene Forn, Cèlia Marrasé, Ramon Massana, Carlos Pedrós-Alió, Maria Montserrat Sala, Rafel Simó, Dolors Vaqué, Marta Estrada (2016). Seasonal patterns in phytoplankton photosynthetic parameters and primary production at a coastal NW Mediterranean site. Scientia Marina, 80, 63-77.

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Marta Ribes, Eva Calvo, Juan I. Movilla, Ramiro Logares, R. Coma, Carles Pelejero (2016). Restructuring of the sponge microbiome favors tolerance to ocean acidification. Environmental Microbiology Reports, 8, 536-544.

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Caterina R. Giner, Irene Forn, Sarah Romac, Ramiro Logares, Colomban De Vargas, Ramon Massana (2016). Environmental Sequencing Provides Reasonable Estimates of the Relative Abundance of Specific Picoeukaryotes. Applied and Environmental Microbiology, 82, 4757-4766.

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Javier del Campo, Laure Guillou, Elisabeth Hehenberger, Ramiro Logares, Purificación López-García, Ramon Massana (2016). Ecological and evolutionary significance of novel protist lineages. European Journal of Protistology, 55, 4-11.

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Gonzalo L Pérez, Martí Galí, Sarah-Jeanne Royer, Hugo Sarmento, Josep M. Gasol, Cèlia Marrasé, Rafel Simó (2016). Bio-optical characterization of offshore NW Mediterranean waters: CDOM contribution to the absorption budget and diffuse attenuation of downwelling irradiance. Deep Sea Research Part I: Oceanographic Research Papers, 114, 111-127.

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Bibiana G Crespo, Philip J Wallhead, Ramiro Logares, Carlos Pedrós-Alió (2016). Probing the Rare Biosphere of the North-West Mediterranean Sea: An Experiment with High Sequencing Effort. PLOS ONE, 11, e0159195.

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Marta Sebastián, Alastair F Smith, José M González, Helen F Fredricks, Benjamin Van Mooy, Michal Koblížek, Joost Brandsma, Grielof Koster, Mireia Mestre, Behzad Mostajir, Paraskevi Pitta, Anthony D Postle, Pablo Sánchez, Josep M. Gasol, David J Scanlan, Yin Chen (2016). Lipid remodelling is a widespread strategy in marine heterotrophic bacteria upon phosphorus deficiency. The ISME Journal, 10, 968-978.

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Massimo C. Pernice, Caterina R. Giner, Ramiro Logares, Júlia Perera-Bel, Silvia G. Acinas, Carlos M Duarte, Josep M. Gasol, Ramon Massana (2016). Large variability of bathypelagic microbial eukaryotic communities across the world’s oceans. The ISME Journal, 10, 945-958.

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Guillem Salazar, Fran Cornejo-Castillo, Verónica Benítez-Barrios, Eugenio Fraile-Nuez, X Antón Álvarez-Salgado, Carlos M Duarte, Josep M. Gasol, Silvia G. Acinas (2016). Global diversity and biogeography of deep-sea pelagic prokaryotes. The ISME Journal, 10, 596-608.

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Marina Gerea, Juan F. Saad, Irina Izaguirre, Claudia Queimaliños, Josep M. Gasol, Fernando Unrein (2016). Presence, abundance and bacterivory of the mixotrophic algae Pseudopedinella (Dictyochophyceae) in freshwater environments. Aquatic Microbial Ecology, 76, 219-232.

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Ana M. Cabello, Mikel Latasa, Irene Forn, XosÉ Anxelu G. MorÁn, Ramon Massana (2016). Vertical distribution of major photosynthetic picoeukaryotic groups in stratified marine waters. 18, 1578--1590.

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Judit Bellés-Garulera, Magda Vila, Encarna Borrull, Pilar Riobó, José M. Franco, Maria Montserrat Sala (2016). Variability of planktonic and epiphytic vibrios in a coastal environment affected by Ostreopsis blooms. 80, 97--106.

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Maria C Garcia-Chaves, Matthew T Cottrell, David L Kirchman, Clara Ruiz-González, Paul a Del Giorgio (2016). Single-cell activity of freshwater aerobic anoxygenic phototrophic bacteria and their contribution to biomass production. The ISME Journal, 10, 1579--1588.

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Carina Bunse, Daniel Lundin, Christofer M. G. Karlsson, Neelam Akram, Maria Vila-Costa, Joakim Palovaara, Lovisa Svensson, Karin Holmfeldt, José M. González, Eva Calvo, Carles Pelejero, Cèlia Marrasé, Mark Dopson, Josep M. Gasol, Jarone Pinhassi (2016). Response of marine bacterioplankton pH homeostasis gene expression to elevated CO2. 6, 483--487.

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Felipe H. Coutinho, B. E. Dutilh, C. C. Thompson, F. L. Thompson (2016). Proposal of fifteen new species of Parasynechococcus based on genomic, physiological and ecological features. Archives of Microbiology, 198, 973--986.

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Jesús M. Arrieta, Carlos M. Duarte, Maria Montserrat Sala, Jordi Dachs (2016). Out of Thin Air: Microbial Utilization of Atmospheric Gaseous Organics in the Surface Ocean. 6,

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Federico Baltar, Joakim Palovaara, Fernando Unrein, Philippe Catala, Karel Horňák, Karel Šimek, Dolors Vaqué, Ramon Massana, Josep M. Gasol, Jarone Pinhassi (2016). Marine bacterial community structure resilience to changes in protist predation under phytoplankton bloom conditions. 10, 568--581.

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Juan Pablo Niño‐García, Clara Ruiz‐González, Paul A. Del Giorgio (2016). Landscape‐scale spatial abundance distributions discriminate core from random components of boreal lake bacterioplankton. Ecology Letters, 19, 1506--1515.

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Josep-Maria Gili, Rebeca Zapata-Guardiola, Enrique Isla, Dolors Vaqué, Andrés Barbosa, Leopoldo García-Sancho, Antonio Quesada (2016). Introduction to the special issue on the Life in Antarctica: Boundaries and Gradients in a Changing Environment (XIth SCAR Biology Symposium). Polar Biology, 39, 1-10.

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Juan Pablo Niño-García, Clara Ruiz-González, Paul a Del Giorgio (2016). Interactions between hydrology and water chemistry shape bacterioplankton biogeography across boreal freshwater networks. The ISME Journal, 10, 1755--1766.

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Ana M Cabello, Fran Cornejo-Castillo, Nicolas Raho, Dolors Blasco, Montserrat Vidal, Stéphane Audic, Colomban De Vargas, Mikel Latasa, Silvia G. Acinas, Ramon Massana (2016). Global distribution and vertical patterns of a prymnesiophyte–cyanobacteria obligate symbiosis. 10, 693--706.

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Isabel Ferrera, Caterina R. Giner, Albert Reñé, Jordi Camp, Ramon Massana, Josep M. Gasol, Esther Garcés (2016). Evaluation of Alternative High-Throughput Sequencing Methodologies for the Monitoring of Marine Picoplanktonic Biodiversity Based on rRNA Gene Amplicons. 3,

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Fran L. Aparicio, Mar Nieto-Cid, Encarna Borrull, Eva Calvo, Carles Pelejero, Maria Montserrat Sala, Jarone Pinhassi, Josep M. Gasol, Cèlia Marrasé (2016). Eutrophication and acidification: Do they induce changes in the dissolved organic matter dynamics in the coastal Mediterranean Sea?. 563-564, 179--189.

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T. S. Catalá, X. A. Álvarez-Salgado, J. Otero, F. Iuculano, B. Companys, B. Horstkotte, C. Romera-Castillo, M. Nieto-Cid, M. Latasa, X. A. G. Morán, Josep M. Gasol, C. Marrasé, C. A. Stedmon, I. Reche (2016). Drivers of fluorescent dissolved organic matter in the global epipelagic ocean. 61, 1101--1119.

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M Romina Schiaffino, M Laura Sánchez, Marina Gerea, Fernando Unrein, Vanessa Balagué, Josep M. Gasol, Irina Izaguirre (2016). Distribution patterns of the abundance of major bacterial and archaeal groups in Patagonian lakes. Journal of Plankton Research, 38, 64-82.

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Christian Lønborg, L. Antonio Cuevas, Thomas Reinthaler, Gerhard J. Herndl, Josep M. Gasol, XosÉ Anxelu G. MorÁn, Nicholas R. Bates, Xosé A. Álvarez-Salgado (2016). Depth Dependent Relationships between Temperature and Ocean Heterotrophic Prokaryotic Production. 3,

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Gregory K. Farrant, Hugo Doré, Fran Cornejo-Castillo, Frédéric Partensky, Morgane Ratin, Martin Ostrowski, Frances D. Pitt, Patrick Wincker, David J. Scanlan, Daniele Iudicone, Silvia G. Acinas, Laurence Garczarek (2016). Delineating ecologically significant taxonomic units from global patterns of marine picocyanobacteria. 113,

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Felipe H. Coutinho, Diogo Antonio Tschoeke, Fabiano Thompson, Cristiane Thompson (2016). Comparative genomics of textitSynechococcus and proposal of the new genus textitParasynechococcus. PeerJ, 4, e1522.

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Mar Benavides, Sophie Bonnet, Nauzet Hernández, Alba María Martínez-Pérez, Mar Nieto-Cid, Xosé Antón Álvarez-Salgado, Isabel Baños, María F. Montero, Ignacio P. Mazuecos, Josep M. Gasol, Helena Osterholz, Thorsten Dittmar, Ilana Berman-Frank, Javier Arístegui (2016). Basin-wide N $_ extrm2$ fixation in the deep waters of the Mediterranean Sea. 30, 952--961.

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Andrés Barbosa, Vanessa Balagué, Francisco Valera, Ana Martínez, Jesús Benzal, Miguel Motas, Julia I. Diaz, Alex Mira, Carlos Pedrós-Alió (2016). Age-Related Differences in the Gastrointestinal Microbiota of Chinstrap Penguins (Pygoscelis antarctica). 11, e0153215.

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Anna Kopf, Mesude Bicak, Renzo Kottmann, Julia Schnetzer, Ivaylo Kostadinov, Katja Lehmann, Antonio Fernandez-Guerra, Christian Jeanthon, Eyal Rahav, Matthias Ullrich, Antje Wichels, Gunnar Gerdts, Paraskevi Polymenakou, Giorgos Kotoulas, Rania Siam, Rehab Z Abdallah, Eva C Sonnenschein, Thierry Cariou, Fergal O’Gara, Stephen Jackson, Sandi Orlic, Michael Steinke, Julia Busch, Bernardo Duarte, Isabel Caçador, João Canning-Clode, Oleksandra Bobrova, Viggo Marteinsson, Eyjolfur Reynisson, Clara Magalhães Loureiro, Gian Marco Luna, Grazia Marina Quero, Carolin R Löscher, Anke Kremp, Marie E DeLorenzo, Lise Øvreås, Jennifer Tolman, Julie LaRoche, Antonella Penna, Marc Frischer, Timothy Davis, Barker Katherine, Christopher P Meyer, Sandra Ramos, Catarina Magalhães, Florence Jude-Lemeilleur, Ma Leopoldina Aguirre-Macedo, Shiao Wang, Nicole Poulton, Scott Jones, Rachel Collin, Jed a Fuhrman, Pascal Conan, Cecilia Alonso, Noga Stambler, Kelly Goodwin, Michael M Yakimov, Federico Baltar, Levente Bodrossy, Jodie Van De Kamp, Dion Mf Frampton, Martin Ostrowski, Paul Van Ruth, Paul Malthouse, Simon Claus, Klaas Deneudt, Jonas Mortelmans, Sophie Pitois, David Wallom, Ian Salter, Rodrigo Costa, Declan C Schroeder, Mahrous M Kandil, Valentina Amaral, Florencia Biancalana, Rafael Santana, Maria Luiza Pedrotti, Takashi Yoshida, Hiroyuki Ogata, Tim Ingleton, Kate Munnik, Naiara Rodriguez-Ezpeleta, Veronique Berteaux-Lecellier, Patricia Wecker, Ibon Cancio, Daniel Vaulot, Christina Bienhold, Hassan Ghazal, Bouchra Chaouni, Soumya Essayeh, Sara Ettamimi, El Houcine Zaid, Noureddine Boukhatem, Abderrahim Bouali, Rajaa Chahboune, Said Barrijal, Mohammed Timinouni, Fatima El Otmani, Mohamed Bennani, Marianna Mea, Nadezhda Todorova, Ventzislav Karamfilov, Petra Ten Hoopen, Guy Cochrane, Stephane L’Haridon, Kemal Can Bizsel, Alessandro Vezzi, Federico M Lauro, Patrick Martin, Rachelle M Jensen, Jamie Hinks, Susan Gebbels, Riccardo Rosselli, Fabio De Pascale, Riccardo Schiavon, Antonina Dos Santos, Emilie Villar, Stéphane Pesant, Bruno Cataletto, Francesca Malfatti, Ranjith Edirisinghe, Jorge a Herrera Silveira, Michele Barbier, Valentina Turk, Tinkara Tinta, Wayne J Fuller, Ilkay Salihoglu, Nedime Serakinci, Mahmut Cerkez Ergoren, Eileen Bresnan, Juan Iriberri, Paul Anders Fronth Nyhus, Edvardsen Bente, Hans Erik Karlsen, Peter N Golyshin, Josep M. Gasol, Snejana Moncheva, Nina Dzhembekova, Zackary Johnson, Christopher David Sinigalliano, Maribeth Louise Gidley, Adriana Zingone, Roberto Danovaro, George Tsiamis, Melody S Clark, Ana Cristina Costa, Monia El Bour, Ana M Martins, R Eric Collins, Anne-Lise Ducluzeau, Jonathan Martinez, Mark J Costello, Linda a Amaral-Zettler, Jack a Gilbert, Neil Davies, Dawn Field, Frank Oliver Glöckner (2015). The ocean sampling day consortium. GigaScience, 4, 27.

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Eva Teira, Víctor Hernando-Morales, Fran Cornejo-Castillo, Laura Alonso-Sáez, Hugo Sarmento, Joaquín Valencia-Vila, Teresa Serrano Catalá, Marta Hernández-Ruiz, Marta M Varela, Isabel Ferrera, Xosé Anxelu Gutiérrez Morán, Josep M. Gasol (2015). Sample Dilution and Bacterial Community Composition Influence Empirical Leucine-to-Carbon Conversion Factors in Surface Waters of the World’s Oceans. Applied and Environmental Microbiology, 81, 8224-8232.

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Ramiro Logares, Jean-François Mangot, Ramon Massana (2015). Rarity in aquatic microbes: placing protists on the map. Research in Microbiology, 166, 831-841.

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Roxane Maranger, Dolors Vaqué, Dan Nguyen, Marie-Pier Hébert, Elena Lara (2015). Pan-Arctic patterns of planktonic heterotrophic microbial abundance and processes: Controlling factors and potential impacts of warming. Progress in Oceanography, 139, 221-232.

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Sheila Roitman, José Flores-Uribe, Alon Philosof, Ben Knowles, Forest Rohwer, J Cesar Ignacio-Espinoza, Matthew B Sullivan, Fran Cornejo-Castillo, Pablo Sánchez, Silvia G. Acinas, Chris L Dupont, Oded Béjà (2015). Closing the gaps on the viral photosystem-I psaDCAB gene organization. Environmental Microbiology, 17, 5100-5108.

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Guillem Salazar, Fran Cornejo-Castillo, Encarna Borrull, Cristina Díez-Vives, Elena Lara, Dolors Vaqué, Jesús M Arrieta, Carlos M Duarte, Josep M. Gasol, Silvia G. Acinas (2015). Particle-association lifestyle is a phylogenetically conserved trait in bathypelagic prokaryotes. Molecular Ecology, 24, 5692-5706.

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Thomas a Richards, Guy Leonard, Frédéric Mahé, Javier del Campo, Sarah Romac, Meredith D M Jones, Finlay Maguire, Micah Dunthorn, Colomban De Vargas, Ramon Massana, Aurélie Chambouvet (2015). Molecular diversity and distribution of marine fungi across 130 European environmental samples. Proceedings of the Royal Society B: Biological Sciences, 282, 20152243.

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M Turon, E Alacid, Ri Figueroa, A Reñé, I Ferrera, I Bravo, I Ramilo, E Garcés (2015). Genetic and phenotypic diversity characterization of natural populations of the parasitoid Parvilucifera sinerae. Aquatic Microbial Ecology, 76, 117-132.

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Susana Agusti, J. I. González-Gordillo, Dolors Vaqué, Marta Estrada, M. I. Cerezo, Guillem Salazar, Josep M. Gasol, Carlos M. Duarte (2015). Ubiquitous healthy diatoms in the deep sea confirm deep carbon injection by the biological pump. 6, 7608.

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Isabel Ferrera, Marta Sebastian, Silvia G. Acinas, Josep M. Gasol (2015). Prokaryotic functional gene diversity in the sunlit ocean: Stumbling in the dark. Current Opinion in Microbiology, 25, 33-39.

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Ramon Massana (2015). Getting specific: making taxonomic and ecological sense of large sequencing data sets. Molecular Ecology, 24, 2904-2906.

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Shinichi Sunagawa, Luis Pedro Coelho, Samuel Chaffron, Jens Roat Kultima, Karine Labadie, Guillem Salazar, Bardya Djahanschiri, Georg Zeller, Daniel R Mende, Adriana Alberti, Fran Cornejo-Castillo, Paul I Costea, Corinne Cruaud, Francesco D'Ovidio, Stefan Engelen, Isabel Ferrera, Josep M. Gasol, Lionel Guidi, Falk Hildebrand, Florian Kokoszka, Cyrille Lepoivre, Gipsi Lima-Mendez, Julie Poulain, Bonnie T Poulos, Marta Royo-Llonch, Hugo Sarmento, Sara Vieira-Silva, Céline Dimier, Marc Picheral, Sarah Searson, Stefanie Kandels-Lewis, Tara Oceans Coordinators, Colomban De Vargas, Gabriel Gorsky, Nigel Grimsley, Pascal Hingamp, Daniele Iudicone, Olivier Jaillon, Fabrice Not, Hiroyuki Ogata, Stephane Pesant, Sabrina Speich, Lars Stemmann, Matthew B Sullivan, Jean Weissenbach, Patrick Wincker, Eric Karsenti, Jeroen Raes, Silvia G. Acinas, Peer Bork, Emmanuel Boss, Chris Bowler, Michael Follows, Lee Karp-Boss, Uros Krzic, Emmanuel G Reynaud, Christian Sardet, Mike Sieracki, Didier Velayoudon (2015). Structure and function of the global ocean microbiome. Science, 348, 1261359.

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Karin Rengefors, Ramiro Logares, Johanna Laybourn-Parry, Rebecca J Gast (2015). Evidence of concurrent local adaptation and high phenotypic plasticity in a polar microeukaryote. Environmental Microbiology, 17, 1510-1519.

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Colomban De Vargas, Stéphane Audic, Nicolas Henry, Johan Decelle, Frédéric Mahé, Ramiro Logares, Enrique Lara, Cédric Berney, Noan Le Bescot, Ian Probert, Margaux Carmichael, Julie Poulain, Sarah Romac, Sébastien Colin, Jean-Marc Aury, Lucie Bittner, Samuel Chaffron, Micah Dunthorn, Stefan Engelen, Olga Flegontova, Lionel Guidi, Aleš Horák, Olivier Jaillon, Gipsi Lima-Mendez, Julius Lukeš, Shruti Malviya, Raphael Morard, Matthieu Mulot, Eleonora Scalco, Raffaele Siano, Flora Vincent, Adriana Zingone, Céline Dimier, Marc Picheral, Sarah Searson, Stefanie Kandels-Lewis, Tara Oceans Coordinators, Silvia G. Acinas, Peer Bork, Chris Bowler, Gabriel Gorsky, Nigel Grimsley, Pascal Hingamp, Daniele Iudicone, Fabrice Not, Hiroyuki Ogata, Stephane Pesant, Jeroen Raes, Michael E Sieracki, Sabrina Speich, Lars Stemmann, Shinichi Sunagawa, Jean Weissenbach, Patrick Wincker, Eric Karsenti, Emmanuel Boss, Michael Follows, Lee Karp-Boss, Uros Krzic, Emmanuel G Reynaud, Christian Sardet, Matthew B Sullivan, Didier Velayoudon (2015). Eukaryotic plankton diversity in the sunlit ocean. Science, 348, 1261605.

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Emilie Villar, Gregory K Farrant, Michael Follows, Laurence Garczarek, Sabrina Speich, Stéphane Audic, Lucie Bittner, Bruno Blanke, Jennifer R Brum, Christophe Brunet, Raffaella Casotti, Alison Chase, John R Dolan, Fabrizio D’Ortenzio, Jean-Pierre Gattuso, Nicolas Grima, Lionel Guidi, Christopher N Hill, Oliver Jahn, Jean-Louis Jamet, Hervé Le Goff, Cyrille Lepoivre, Shruti Malviya, Eric Pelletier, Jean-Baptiste Romagnan, Simon Roux, Sébastien Santini, Eleonora Scalco, Sarah M Schwenck, Atsuko Tanaka, Pierre Testor, Thomas Vannier, Flora Vincent, Adriana Zingone, Céline Dimier, Marc Picheral, Sarah Searson, Stefanie Kandels-Lewis, Tara Oceans Coordinators, Silvia G. Acinas, Peer Bork, Emmanuel Boss, Colomban De Vargas, Gabriel Gorsky, Hiroyuki Ogata, Stéphane Pesant, Matthew B Sullivan, Shinichi Sunagawa, Patrick Wincker, Eric Karsenti, Chris Bowler, Fabrice Not, Pascal Hingamp, Daniele Iudicone (2015). Environmental characteristics of Agulhas rings affect interocean plankton transport. Science, 348, 1261447.

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Gipsi Lima-Mendez, Karoline Faust, Nicolas Henry, Johan Decelle, Sébastien Colin, Fabrizio Carcillo, Samuel Chaffron, J Cesar Ignacio-Espinosa, Simon Roux, Flora Vincent, Lucie Bittner, Youssef Darzi, Jun Wang, Stéphane Audic, Léo Berline, Gianluca Bontempi, Ana M Cabello, Laurent Coppola, Fran Cornejo-Castillo, Francesco D'Ovidio, Luc De Meester, Isabel Ferrera, Marie-José Garet-Delmas, Lionel Guidi, Elena Lara, Stéphane Pesant, Marta Royo-Llonch, Guillem Salazar, Pablo Sánchez, Marta Sebastian, Caroline Souffreau, Céline Dimier, Marc Picheral, Sarah Searson, Stefanie Kandels-Lewis, Tara Oceans Coordinators, Gabriel Gorsky, Fabrice Not, Hiroyuki Ogata, Sabrina Speich, Lars Stemmann, Jean Weissenbach, Patrick Wincker, Silvia G. Acinas, Shinichi Sunagawa, Peer Bork, Matthew B Sullivan, Eric Karsenti, Chris Bowler, Colomban De Vargas, Jeroen Raes (2015). Determinants of community structure in the global plankton interactome. Science, 348, 1262073.

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Andrea Malits, Raffaela Cattaneo, Eva Sintes, Josep M. Gasol, Gerhard J. Herndl, Markus G. Weinbauer (2015). Potential impacts of black carbon on the marine microbial community. Aquatic Microbial Ecology, 75, 27-42.

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Ana Gomes, Josep M. Gasol, Marta Estrada, Leticia Franco-Vidal, Laura Díaz-Pérez, Isabel Ferrera, Xosé Anxelu G Morán (2015). Heterotrophic bacterial responses to the winter–spring phytoplankton bloom in open waters of the NW Mediterranean. Deep Sea Research Part I: Oceanographic Research Papers, 96, 59-68.

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Clara Ruiz-González, Guillem Salazar, Ramiro Logares, Lorenzo Proia, Josep M. Gasol, Sergi Sabater (2015). Weak Coherence in Abundance Patterns Between Bacterial Classes and Their Constituent OTUs Along a Regulated River. 6,

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Silvia G. Acinas, Isabel Ferrera, Hugo Sarmento, Cristina Díez-Vives, Irene Forn, Clara Ruiz-González, Fran Cornejo-Castillo, Guillem Salazar, Josep M. Gasol (2015). Validation of a new catalysed reporter deposition–fluorescence in situ hybridization probe for the accurate quantification of marine Bacteroidetes populations. 17, 3557--3569.

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Isabel Ferrera, Javier Arístegui, José M. González, María F. Montero, Eugenio Fraile-Nuez, Josep M. Gasol (2015). Transient Changes in Bacterioplankton Communities Induced by the Submarine Volcanic Eruption of El Hierro (Canary Islands). 10, e0118136.

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Clara Ruiz‐González, Juan Pablo Niño‐García, Jean‐François Lapierre, Paul A. Del Giorgio (2015). The quality of organic matter shapes the functional biogeography of bacterioplankton across boreal freshwater ecosystems. Global Ecology and Biogeography, 24, 1487--1498.

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Clara Ruiz‐González, Juan Pablo Niño‐García, Paul A. Del Giorgio (2015). Terrestrial origin of bacterial communities in complex boreal freshwater networks. Ecology Letters, 18, 1198--1206.

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Ignacio P Mazuecos, Javier Arístegui, Evaristo Vázquez-Domínguez, Eva Ortega-Retuerta, Josep M. Gasol, Isabel Reche (2015). Temperature control of microbial respiration and growth efficiency in the mesopelagic zone of the South Atlantic and Indian Oceans. Deep Sea Research Part I: Oceanographic Research Papers, 95, 131-138.

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Federico Baltar, Joakim Palovaara, Maria Vila-Costa, Guillem Salazar, Eva Calvo, Carles Pelejero, Cèlia Marrasé, Josep M. Gasol, Jarone Pinhassi (2015). Response of rare, common and abundant bacterioplankton to anthropogenic perturbations in a Mediterranean coastal site. 91,

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Ramon Massana (2015). Protistan Diversity in Environmental Molecular Surveys. Marine Protists, 3-21.

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Felipe H. Coutinho, Pedro M. Meirelles, Ana Paula B. Moreira, Rodolfo P. Paranhos, Bas E. Dutilh, Fabiano L. Thompson (2015). Niche distribution and influence of environmental parameters in marine microbial communities: a systematic review. PeerJ, 3, e1008.

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Fran L. Aparicio, Mar Nieto-Cid, Encarna Borrull, Estela Romero, Colin A. Stedmon, Maria Montserrat Sala, Josep M. Gasol, Aida F. Ríos, Cèlia Marrasé (2015). Microbially-Mediated Fluorescent Organic Matter Transformations in the Deep Ocean. Do the Chemical Precursors Matter?. 2,

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Hugo Sarmento, Emilio O. Casamayor, Jean-Christophe Auguet, Maria Vila-Costa, Marisol Felip, Lluís Camarero, Josep M. Gasol (2015). Microbial food web components, bulk metabolism, and single-cell physiology of piconeuston in surface microlayers of high-altitude lakes. 6,

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Raven L. Bier, Emily S. Bernhardt, Claudia M. Boot, Emily B. Graham, Edward K. Hall, Jay T. Lennon, Diana R. Nemergut, Brooke B. Osborne, Clara Ruiz-González, Joshua P. Schimel, Mark P. Waldrop, Matthew D. Wallenstein (2015). Linking microbial community structure and microbial processes: an empirical and conceptual overview. FEMS Microbiology Ecology, 91, fiv113.

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Elena Lara, Karin Holmfeldt, Natalie Solonenko, Elisabet Laia Sà, J Cesar Ignacio-Espinoza, Fran Cornejo-Castillo, Nathan C Verberkmoes, Dolors Vaqué, Matthew B Sullivan, Silvia G. Acinas (2015). Life-Style and Genome Structure of Marine Pseudoalteromonas Siphovirus B8b Isolated from the Northwestern Mediterranean Sea. PLOS ONE, 10, e0114829.

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Josep M. Gasol, Xosé Anxelu G Morán (2015). Flow Cytometric Determination of Microbial Abundances and Its Use to Obtain Indices of Community Structure and Relative Activity. Hydrocarbon and Lipid Microbiology Protocols, 159-187.

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Julia A. Boras, Dolors Vaqué, Francesc Maynou, Elisabet L. Sà, Markus G. Weinbauer, Maria Montserrat Sala (2015). Factors shaping bacterial phylogenetic and functional diversity in coastal waters of the NW Mediterranean Sea. 154, 102--110.

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Alexandra Coello-Camba, Susana Agustí, Dolors Vaqué, Johnna Holding, Jesús M. Arrieta, Paul Wassmann, Carlos M. Duarte (2015). Experimental Assessment of Temperature Thresholds for Arctic Phytoplankton Communities. 38, 873--885.

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Javier del Campo, Diego Mallo, Ramon Massana, Colomban De Vargas, Thomas A. Richards, Iñaki Ruiz-Trillo (2015). Diversity and distribution of unicellular opisthokonts along the European coast analysed using high-throughput sequencing. 17, 3195--3207.

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D.O. Santoro, A.M. Cardoso, Felipe H. Coutinho, L.H. Pinto, R.P. Vieira, R.M. Albano, M.M. Clementino (2015). Diversity and antibiotic resistance profiles of Pseudomonads from a hospital wastewater treatment plant. Journal of Applied Microbiology, 119, 1527--1540.

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Isabel Ferrera, Carles M Borrego, Guillem Salazar, Josep M. Gasol (2014). Marked seasonality of aerobic anoxygenic phototrophic bacteria in the coastal NW Mediterranean Sea as revealed by cell abundance, pigment concentration and pyrosequencing of pufM gene. Environmental Microbiology, 16, 2953-2965.

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Cedric Morana, Hugo Sarmento, Jean-Pierre Descy, Josep M. Gasol, Alberto v Borges, Steven Bouillon, François Darchambeau (2014). Production of dissolved organic matter by phytoplankton and its uptake by heterotrophic prokaryotes in large tropical lakes. Limnology and Oceanography, 59, 1364-1375.

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Itziar Lekunberri, Josep M. Gasol, Silvia G. Acinas, Laura Gómez-Consarnau, Bibiana G Crespo, Emilio O Casamayor, Ramon Massana, Carlos Pedrós-Alió, Jarone Pinhassi (2014). The phylogenetic and ecological context of cultured and whole genome-sequenced planktonic bacteria from the coastal NW Mediterranean Sea. Systematic and Applied Microbiology, 37, 216-228.

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Javier del Campo, Michael E Sieracki, Robert Molestina, Patrick Keeling, Ramon Massana, Iñaki Ruiz-Trillo (2014). The others: our biased perspective of eukaryotic genomes. Trends in Ecology & Evolution, 29, 252-259.

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Ramon Massana, Javier del Campo, Michael E Sieracki, Stéphane Audic, Ramiro Logares (2014). Exploring the uncultured microeukaryote majority in the oceans: reevaluation of ribogroups within stramenopiles. The ISME Journal, 8, 854-866.

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Cristina Díez-Vives, Josep M. Gasol, Silvia G. Acinas (2014). Spatial and temporal variability among marine Bacteroidetes populations in the NW Mediterranean Sea. Systematic and Applied Microbiology, 37, 68-78.

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Thomas Lefort, Josep M. Gasol (2014). Short-time scale coupling of picoplankton community structure and single-cell heterotrophic activity in winter in coastal NW Mediterranean Sea waters. Journal of Plankton Research, 36, 243-258.

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Beatriz Fernández-Gómez, Maria Montserrat Sala, Carlos Pedrós-Alió (2014). Seasonal changes in substrate utilization patterns by bacterioplankton in the Amundsen Gulf (western Arctic). 37, 1321--1329.

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Carlos Carreras, Catalina Monzón-Argüello, Luis Felipe López-Jurado, Pascual Calabuig, Juan Jesús Bellido, Juan José Castillo, Pablo Sánchez, Pas Medina, Jesús Tomás, Patricia Gozalbes, Gloria Fernández, Adolfo Marco, Luis Cardona (2014). Origin and dispersal routes of foreign green and Kemp’s ridley turtles in Spanish Atlantic and Mediterranean waters. Amphibia-Reptilia, 35, 73--86.

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Fernando Unrein, Josep M. Gasol, Fabrice Not, Irene Forn, Ramon Massana (2014). Mixotrophic haptophytes are key bacterial grazers in oligotrophic coastal waters. The ISME Journal, 8, 164-176.

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Marta Estrada, Dolors Vaqué (2014). Microbial Components.

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François Chauvigné, Cinta Zapater, Josep M. Gasol, Joan Cerdà (2014). Germ-line activation of the luteinizing hormone receptor directly drives spermiogenesis in a nonmammalian vertebrate. 111, 1427--1432.

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Joana Bondoso, Vanessa Balagué, Josep M. Gasol, Olga M. Lage (2014). Community composition of the extitPlanctomycetes associated with different macroalgae. 88, 445--456.

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Zuriñe Baña, Begoña Ayo, Cèlia Marrasé, Josep M. Gasol, Juan Iriberri (2014). Changes in bacterial metabolism as a response to dissolved organic matter modification during protozoan grazing in coastal Cantabrian and Mediterranean waters. 16, 498--511.

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Dolors Vaqué, Laura Alonso-Sáez, Javier Arístegui, Susana Agustí, Carlos M Duarte, Maria Montserrat Sala, Evaristo Vázquez-Domínguez, Josep M. Gasol (2014). Bacterial production and losses to predators along an open ocean productivity gradient in the Subtropical North East Atlantic Ocean. Journal of Plankton Research, 36, 198-213.

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Felipe H. Coutinho, Cynthia B. Silveira, Leonardo H. Pinto, Gigliola R. B. Salloto, Alexander M. Cardoso, Orlando B. Martins, Ricardo P. Vieira, Maysa M. Clementino (2014). Antibiotic Resistance is Widespread in Urban Aquatic Environments of Rio de Janeiro, Brazil. Microbial Ecology, 68, 441--452.

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Martí Galí, Rafel Simó, G. L. Pérez, Clara Ruiz-González, Hugo Sarmento, Sarah-Jeanne Royer, A. Fuentes-Lema, Josep M. Gasol (2013). Differential response of planktonic primary, bacterial, and dimethylsulfide production rates to static vs. dynamic light exposure in upper mixed-layer summer sea waters. Biogeosciences, 10, 7983-7998.

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Unni Vik, Ramiro Logares, Rakel Blaalid, Rune Halvorsen, Tor Carlsen, Ingrid Bakke, Anne-Brit Kolstø, Ole Andreas Økstad, Håvard Kauserud (2013). Different bacterial communities in ectomycorrhizae and surrounding soil. Scientific Reports, 3, 3471.

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José C Xavier, Andrés Barbosa, Susana Agustí, Laura Alonso-Sáez, Pedro Alvito, Julia Ameneiro, Conxita Ávila, Alexandra Baeta, João Canário, Raquel Carmona, Paulo Catry, Filipe Ceia, Melody S Clark, Francisco J Cristobo, Bruno Cruz, Carlos M Duarte, Blanca Figuerola, Josep-Maria Gili, Ana R Gonçalves, Francisco J.L Gordillo, José P Granadeiro, Miguel Guerreiro, Enrique Isla, Carlos Jiménez, Pablo J López-González, Sílvia Lourenço, João C Marques, Elena Moreira, Ana M Mota, Marta Nogueira, Laura Núñez-Pons, Covadonga Orejas, Vitor H Paiva, Albert Palanques, Gareth a Pearson, Carlos Pedrós-Alió, Álvaro L Peña Cantero, Deborah M Power, Jaime a Ramos, Sergi Rossi, José Seco, Elisabet Sañé, Ester a Serrão, Sergi Taboada, Sílvia Tavares, Núria Teixidó, Dolors Vaqué, Tiago Valente, Elsa Vázquez, Rui P Vieira, Benjamin Viñegla (2013). Polar marine biology science in Portugal and Spain: Recent advances and future perspectives. Journal of Sea Research, 83, 9-29.

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Javier del Campo, Vanessa Balagué, Irene Forn, Itziar Lekunberri, Ramon Massana (2013). Culturing Bias in Marine Heterotrophic Flagellates Analyzed Through Seawater Enrichment Incubations. Microbial Ecology, 66, 489-499.

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Jarone Pinhassi, Josep M. Gasol (2013). In Memoriam Tom Berman. Aquatic Microbial Ecology, 70, 187-187.

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Martí Galí, Rafel Simó, Maria Vila-Costa, Clara Ruiz-González, Josep M. Gasol, Patricia Matrai (2013). Diel patterns of oceanic dimethylsulfide (DMS) cycling: Microbial and physical drivers. Global Biogeochemical Cycles, 27, 620-636.

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Albert Reñé, Miguel De Salas, Jordi Camp, Vanessa Balagué, Esther Garcés (2013). A New Clade, Based on Partial LSU rDNA Sequences, of Unarmoured Dinoflagellates. Protist, 164, 673-685.

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Marta Sebastián, Josep M. Gasol (2013). Heterogeneity in the nutrient limitation of different bacterioplankton groups in the Eastern Mediterranean Sea. The ISME Journal, 7, 1665-1668.

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Thomas Lefort, Josep M. Gasol (2013). Global-scale distributions of marine surface bacterioplankton groups along gradients of salinity, temperature, and chlorophyll: a meta-analysis of fluorescence in situ hybridization studies. Aquatic Microbial Ecology, 70, 111-130.

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Elena Lara, Jesús M. Arrieta, Iñigo Garcia-Zarandona, Julia A. Boras, Carlos M. Duarte, Susana Agustí, Paul F. Wassmann, Dolors Vaqué (2013). Experimental evaluation of the warming effect on viral, bacterial and protistan communities in two contrasting Arctic systems. Aquatic Microbial Ecology, 70, 17-32.

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Raquel Rodríguez-Martínez, Gabrielle Rocap, Guillem Salazar, Ramon Massana (2013). Biogeography of the uncultured marine picoeukaryote MAST-4: temperature-driven distribution patterns. The ISME Journal, 7, 1531-1543.

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Brandon K Swan, Ben Tupper, Alexander Sczyrba, Federico M Lauro, Manuel Martinez-Garcia, José M González, Haiwei Luo, Jody J Wright, Zachary C Landry, Niels W Hanson, Brian P Thompson, Nicole J Poulton, Patrick Schwientek, Silvia G. Acinas, Stephen J Giovannoni, Mary Ann Moran, Steven J Hallam, Ricardo Cavicchioli, Tanja Woyke, Ramunas Stepanauskas (2013). Prevalent genome streamlining and latitudinal divergence of planktonic bacteria in the surface ocean. Proceedings of the National Academy of Sciences, 110, 11463-11468.

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Hugo Sarmento, Cristina Romera-Castillo, Markus Lindh, Jarone Pinhassi, Maria Montserrat Sala, Josep M. Gasol, Cèlia Marrase, Gordon T Taylor (2013). Phytoplankton species-specific release of dissolved free amino acids and their selective consumption by bacteria. Limnology and Oceanography, 58, 1123-1135.

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Jun Gong, Jun Dong, Xihan Liu, Ramon Massana (2013). Extremely High Copy Numbers and Polymorphisms of the rDNA Operon Estimated from Single Cell Analysis of Oligotrich and Peritrich Ciliates. Protist, 164, 369-379.

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Ramon Massana, Ramiro Logares (2013). Eukaryotic versus prokaryotic marine picoplankton ecology. Environmental Microbiology, 15, 1254-1261.

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Clara Ruiz-González, Lorenzo Proia, Isabel Ferrera, Josep M. Gasol, Sergi Sabater (2013). Effects of large river dam regulation on bacterioplankton community structure. FEMS Microbiology Ecology, 84, 316-331.

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Beatriz Fernández-Gómez, Michael Richter, Margarete Schüler, Jarone Pinhassi, Silvia G. Acinas, José M González, Carlos Pedrós-Alió (2013). Ecology of marine Bacteroidetes: a comparative genomics approach. The ISME Journal, 7, 1026-1037.

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Martí Gali, Clara Ruiz-González, Thomas Lefort, Josep M. Gasol, Clara Cardelús, Cristina Romera-Castillo, Rafel Simó (2013). Spectral irradiance dependence of sunlight effects on plankton dimethylsulfide production. Limnology and Oceanography, 58, 489-504.

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M. Romina Schiaffino, Josep M. Gasol, Irina Izaguirre, Fernando Unrein (2013). Picoplankton abundance and cytometric group diversity along a trophic and latitudinal lake gradient. Aquatic Microbial Ecology, 68, 231-250.

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Esther Garcés, Dolors Vaqué (2013). Editorial. Scientia Marina, 77, 7.

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Javier del Campo, Fabrice Not, Irene Forn, Michael E Sieracki, Ramon Massana (2013). Taming the smallest predators of the oceans. The ISME Journal, 7, 351-358.

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Massimo C. Pernice, Ramiro Logares, Laure Guillou, Ramon Massana (2013). General Patterns of Diversity in Major Marine Microeukaryote Lineages. PLoS ONE, 8, e57170.

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Cynthia B. Silveira, Alexander M. Cardoso, Felipe H. Coutinho, Joyce L. Lima, Leonardo H. Pinto, Rodolpho M. Albano, Maysa M. Clementino, Orlando B. Martins, Ricardo P. Vieira (2013). Tropical Aquatic Archaea Show Environment-Specific Community Composition. PLoS ONE, 8, e76321.

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Pablo Sánchez, Pedro Pablo Ambrosio, Rosa Flos (2013). Stocking density affects Senegalese sole (Solea senegalensis , Kaup) growth independently of size dispersion, evaluated using an individual photo-identification technique. Aquaculture Research, 44, 231--241.

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Cristina Romera-Castillo, Xosé Antón Álvarez-Salgado, Martí Galí, Josep M. Gasol, Célia Marrasé (2013). Combined effect of light exposure and microbial activity on distinct dissolved organic matter pools. A seasonal field study in an oligotrophic coastal system (Blanes Bay, NW Mediterranean). Marine Chemistry, 148, 44-51.

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Federico Baltar, Javier Arístegui, Josep M. Gasol, Taichi Yokokawa, Gerhard J. Herndl (2013). Bacterial Versus Archaeal Origin of Extracellular Enzymatic Activity in the Northeast Atlantic Deep Waters. 65, 277--288.

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Clara Ruiz-González, Rafel Simó, Ruben Sommaruga, Josep M. Gasol (2013). Away from darkness: a review on the effects of solar radiation on heterotrophic bacterioplankton activity. 4,

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Marina Gerea, Claudia Queimaliños, M Romina Schiaffino, Irina Izaguirre, Irene Forn, Ramon Massana, Fernando Unrein (2013). In situ prey selection of mixotrophic and heterotrophic flagellates in Antarctic oligotrophic lakes: an analysis of the digestive vacuole content. Journal of Plankton Research, 35, 201-212.

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Tina Šilović, Vanessa Balagué, Sandi Orlić, Carlos Pedrós-Alió (2012). Picoplankton seasonal variation and community structure in the northeast Adriatic coastal zone. FEMS Microbiology Ecology, 82, 678-691.

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Maya P Stoyneva, Jean-Pierre Descy, Vanessa Balagué, Pierre Compère, Maria Leitao, Hugo Sarmento (2012). The queer Tetraëdron minimum from Lake Kivu (Eastern Africa): is it a result of a human impact?. Hydrobiologia, 698, 273-283.

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Cristina Díez-Vives, Josep M. Gasol, Silvia G. Acinas (2012). Evaluation of Marine Bacteroidetes-Specific Primers for Microbial Diversity and Dynamics Studies. Microbial Ecology, 64, 1047-1055.

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Evaristo Vázquez-Domínguez, Dolors Vaqué, Josep M. Gasol (2012). Temperature effects on the heterotrophic bacteria, heterotrophic nanoflagellates, and microbial top predators of the NW Mediterranean. Aquatic Microbial Ecology, 67, 107-121.

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Ramiro Logares, Stephane Audic, Sebastien Santini, Massimo C. Pernice, Colomban De Vargas, Ramon Massana (2012). Diversity patterns and activity of uncultured marine heterotrophic flagellates unveiled with pyrosequencing. The ISME Journal, 6, 1823-1833.

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Hugo Sarmento, Josep M. Gasol (2012). Use of phytoplankton-derived dissolved organic carbon by different types of bacterioplankton. Environmental Microbiology, 14, 2348-2360.

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Clara Ruiz-González, Martí Galí, Eva Sintes, Gerhard J Herndl, Josep M. Gasol, Rafel Simó (2012). Sunlight Effects on the Osmotrophic Uptake of DMSP-Sulfur and Leucine by Polar Phytoplankton. PLoS ONE, 7, e45545.

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Clara Ruiz-González, Martí Galí, Josep M. Gasol, Rafel Simó (2012). Sunlight effects on the DMSP-sulfur and leucine assimilation activities of polar heterotrophic bacterioplankton. Biogeochemistry, 110, 57-74.

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Laura Gómez-Consarnau, Markus v Lindh, Josep M. Gasol, Jarone Pinhassi (2012). Structuring of bacterioplankton communities by specific dissolved organic carbon compounds. Environmental Microbiology, 14, 2361-2378.

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Jordi Font, Dolors Vaqué (2012). Editorial. Scientia Marina, 76, 423.

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Marta Sebastián, Paraskevi Pitta, José M González, T Frede Thingstad, Josep M. Gasol (2012). Bacterioplankton groups involved in the uptake of phosphate and dissolved organic phosphorus in a mesocosm experiment with P-starved Mediterranean waters. Environmental Microbiology, 14, 2334-2347.

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Clara Ruiz-González, Martí Galí, Thomas Lefort, Clara Cardelús, Rafel Simó, Josep M. Gasol (2012). Annual variability in light modulation of bacterial heterotrophic activity in surface northwestern Mediterranean waters. Limnology and Oceanography, 57, 1376-1388.

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Felix Weber, Javier del Campo, Claudia Wylezich, Ramon Massana, Klaus Jürgens (2012). Unveiling Trophic Functions of Uncultured Protist Taxa by Incubation Experiments in the Brackish Baltic Sea. PLoS ONE, 7, e41970.

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Gabriel Yvon-Durocher, Jane M Caffrey, Alessandro Cescatti, Matteo Dossena, Paul Del Giorgio, Josep M. Gasol, José M Montoya, Jukka Pumpanen, Peter a Staehr, Mark Trimmer, Guy Woodward, Andrew P Allen (2012). Reconciling the temperature dependence of respiration across timescales and ecosystem types. Nature, 487, 472-476.

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Gemma Vila-Reixach, Josep M. Gasol, Clara Cardelús, Montserrat Vidal (2012). Seasonal dynamics and net production of dissolved organic carbon in an oligotrophic coastal environment. Marine Ecology Progress Series, 456, 7-19.

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Maria Vila-Costa, Josep M. Gasol, Shalabh Sharma, Mary Ann Moran (2012). Community analysis of high- and low-nucleic acid-containing bacteria in NW Mediterranean coastal waters using 16S rDNA pyrosequencing. Environmental Microbiology, 14, 1390-1402.

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Raquel Rodriguez-Martinez, Gabrielle Rocap, Ramiro Logares, Sarah Romac, Ramon Massana (2012). Low Evolutionary Diversification in a Widespread and Abundant Uncultured Protist (MAST-4). Molecular Biology and Evolution, 29, 1393-1406.

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Marta Ribes, Eroteida Jiménez, Gitai Yahel, Paula López-Sendino, Beatriz Díez, Ramon Massana, Jasmine H Sharp, Rafel Coma (2012). Functional convergence of microbes associated with temperate marine sponges. Environmental Microbiology, 14, 1224-1239.

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Clara Ruiz-González, Rafel Simó, Maria Vila-Costa, Ruben Sommaruga, Josep M. Gasol (2012). Sunlight modulates the relative importance of heterotrophic bacteria and picophytoplankton in DMSP-sulphur uptake. The ISME Journal, 6, 650-659.

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Carlos M Duarte, Susana Agustí, Paul Wassmann, Jesús M Arrieta, Miquel Alcaraz, Alexandra Coello, Núria Marbà, Iris E Hendriks, Johnna Holding, Iñigo García-Zarandona, Emma Kritzberg, Dolors Vaqué (2012). Tipping Elements in the Arctic Marine Ecosystem. AMBIO, 41, 44-55.

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Itziar Lekunberri, Thomas Lefort, Cristina Romera-Castillo, Clara Cardelús, Montserrat Coll-Lladó, Clara Ruiz-González, Cèlia Marrasé, Josep M. Gasol (2012). Relationship between induced phytoplankton blooms and the structure and dynamics of the free-living heterotrophic bacterial community. Marine Ecology Progress Series, 448, 23-37.

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Irina Izaguirre, Rodrigo Sinistro, M Romina Schiaffino, Maria L Sánchez, Fernando Unrein, Ramon Massana (2012). Grazing rates of protists in wetlands under contrasting light conditions due to floating plants. Aquatic Microbial Ecology, 65, 221-232.

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Cristina Linares, Joaquim Garrabou, Bernat Hereu, David Diaz, Christian Marschal, Enric Sala, Mikel Zabala (2012). Assessing the Effectiveness of Marine Reserves on Unsustainably Harvested Long-Lived Sessile Invertebrates. Conservation Biology, 26, 88-96.

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Clara Ruiz-González, Thomas Lefort, Martí Galí, Maria Montserrat Sala, Ruben Sommaruga, Rafel Simó, Josep M. Gasol (2012). Seasonal patterns in the sunlight sensitivity of bacterioplankton from Mediterranean surface coastal waters. FEMS Microbiology Ecology, 79, 661--674.

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Gigliola R. B. Salloto, Alexander M. Cardoso, Felipe H. Coutinho, Leonardo H. Pinto, Ricardo P. Vieira, Catia Chaia, Joyce L. Lima, Rodolpho M. Albano, Orlando B. Martins, Maysa M. Clementino (2012). Pollution Impacts on Bacterioplankton Diversity in a Tropical Urban Coastal Lagoon System. PLoS ONE, 7, e51175.

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J. Artigas, S. Soley, M.C. Pérez-Baliero, A.M. Romaní, C. Ruiz-González, S. Sabater (2012). Phosphorus use by planktonic communities in a large regulated Mediterranean river. Science of The Total Environment, 426, 180--187.

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Federico Baltar, Javier Arístegui, Josep M. Gasol, Gerhard J. Herndl (2012). Microbial Functioning and Community Structure Variability in the Mesopelagic and Epipelagic Waters of the Subtropical Northeast Atlantic Ocean. 78, 3309--3316.

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Pablo Sánchez, Jordi Viñas, Jaime R. Alvarado Bremer, Pedro Pablo Ambrosio, Rosa Flos (2012). Loss of genetic variability in a hatchery strain of Senegalese sole (Solea senegalensis) revealed by sequence data of the mitochondrial DNA control region and microsatellite markers. Scientia Marina, 76, 225--235.

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Clara Ruiz-González, Thomas Lefort, Ramon Massana, Rafel Simó, Josep M. Gasol (2012). Diel changes in bulk and single-cell bacterial heterotrophic activity in winter surface waters of the northwestern Mediterranean Sea. Limnology and Oceanography, 57, 29-42.

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Laura Alonso-Sáez, Olga Sánchez, Josep M. Gasol (2012). Bacterial uptake of low molecular weight organics in the subtropical Atlantic: Are major phylogenetic groups functionally different?. 57, 798--808.

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Ramiro Logares (2011). Population genetics: the next stop for microbial ecologists?. Open Life Sciences, 6, 887-892.

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Albert Reñé, Cecilia Teodora Satta, Esther Garcés, Ramon Massana, Manuel Zapata, Silvia Anglès, Jordi Camp (2011). Gymnodinium litoralis sp. nov. (Dinophyceae), a newly identified bloom-forming dinoflagellate from the NW Mediterranean Sea. Harmful Algae, 12, 11-25.

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Cristina Romera-Castillo, Hugo Sarmento, Xosé Antón Álvarez-Salgado, Josep M. Gasol, Celia Marrasé (2011). Net Production and Consumption of Fluorescent Colored Dissolved Organic Matter by Natural Bacterial Assemblages Growing on Marine Phytoplankton Exudates. Applied and Environmental Microbiology, 77, 7490-7498.

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Andrés Gutiérrez-Rodríguez, Mikel Latasa, Renate Scharek, Ramon Massana, Gemma Vila, Josep M. Gasol (2011). Growth and grazing rate dynamics of major phytoplankton groups in an oligotrophic coastal site. Estuarine, Coastal and Shelf Science, 95, 77-87.

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Andreu Saura, Ramon Massana, Julia a Boras, Irene Forn, Gemma Vila-Reixach, Dolors Vaque (2011). Effect of viruses on marine stramenopile (MAST) communities in an oligotrophic coastal marine system. Journal of Plankton Research, 33, 1709-1718.

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Isabel Ferrera, Josep M. Gasol, Marta Sebastián, Eva Hojerová, Michal Koblížek (2011). Comparison of Growth Rates of Aerobic Anoxygenic Phototrophic Bacteria and Other Bacterioplankton Groups in Coastal Mediterranean Waters. Applied and Environmental Microbiology, 77, 7451-7458.

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Ramon Massana (2011). Eukaryotic Picoplankton in Surface Oceans. Annual Review of Microbiology, 65, 91-110.

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Eva Hojerová, Michal Mašín, Christophe Brunet, Isabel Ferrera, Josep M. Gasol, Michal Koblížek (2011). Distribution and Growth of Aerobic Anoxygenic Phototrophs in the Mediterranean Sea. Environmental Microbiology, 13, 2717-2725.

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M Romina Schiaffino, Fernando Unrein, Josep M. Gasol, Ramon Massana, Vanessa Balagué, Irina Izaguirre (2011). Bacterial community structure in a latitudinal gradient of lakes: the roles of spatial versus environmental factors: Factors shaping bacterioplankton community structure. Freshwater Biology, 56, 1973-1991.

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Olga Sánchez, Laura Garrido, Irene Forn, Ramon Massana, Manuel Ignacio Maldonado, Jordi Mas (2011). Molecular characterization of activated sludge from a seawater-processing wastewater treatment plant. Microbial Biotechnology, 4, 628-642.

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Montserrat Coll-Lladó, Silvia G. Acinas, Cristina Pujades, Carlos Pedrós-Alió (2011). Transcriptome Fingerprinting Analysis: An Approach to Explore Gene Expression Patterns in Marine Microbial Communities. PLoS ONE, 6, e22950.

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Javier del Campo, Ramon Massana (2011). Emerging Diversity within Chrysophytes, Choanoflagellates and Bicosoecids Based on Molecular Surveys. Protist, 162, 435-448.

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Francesc Peters, Dolors Vaqué (2011). Editorial. Scientia Marina, 75, 631.

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Ignasi Forné, Bárbara Castellana, Rubén Marín-Juez, Joan Cerdà, Joaquín Abián, Josep v Planas (2011). Transcriptional and proteomic profiling of flatfish (Solea senegalensis) spermatogenesis. Proteomics, 11, 2195-2211.

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Meredith D M Jones, Irene Forn, Catarina Gadelha, Martin J Egan, David Bass, Ramon Massana, Thomas a Richards (2011). Discovery of novel intermediate forms redefines the fungal tree of life. Nature, 474, 200-203.

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Sofia Loureiro, Albert Reñé, Esther Garcés, Jordi Camp, Dolors Vaqué (2011). Harmful algal blooms (HABs), dissolved organic matter (DOM), and planktonic microbial community dynamics at a near-shore and a harbour station influenced by upwelling (SW Iberian Peninsula). Journal of Sea Research, 65, 401-413.

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Estela Romero, Francesc Peters, Cèlia Marrasé, Òscar Guadayol, Josep M. Gasol, Markus G Weinbauer (2011). Coastal Mediterranean plankton stimulation dynamics through a dust storm event: An experimental simulation. Estuarine, Coastal and Shelf Science, 93, 27-39.

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Ramon Massana, Massimo Pernice, John a Bunge, Javier del Campo (2011). Sequence diversity and novelty of natural assemblages of picoeukaryotes from the Indian Ocean. The ISME Journal, 5, 184-195.

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M. Sebastian, J. W. Ammerman (2011). Role of the phosphatase PhoX in the phosphorus metabolism of the marine bacterium textitRuegeria pomeroyi DSS‐3. Environmental Microbiology Reports, 3, 535--542.

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Urania Christaki, Claude Courties, Ramon Massana, Philippe Catala, Philippe Lebaron, Josep M. Gasol, Mikhail v. Zubkov (2011). Optimized routine flow cytometric enumeration of heterotrophic flagellates using SYBR Green I. 9, 329--339.

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Anne-Laure Tarbe, Stephane Stenuite, Vanessa Balagué, Danny Sinyinza, Jean-Pierre Descy, Ramon Massana (2011). Molecular characterisation of the small-eukaryote community in a tropical Great Lake (Lake Tanganyika, East Africa). Aquatic Microbial Ecology, 62, 177-190.

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C Balestra, L Alonso-Sáez, Josep M. Gasol, R Casotti (2011). Group-specific effects on coastal bacterioplankton of polyunsaturated aldehydes produced by diatoms. 63, 123--131.

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Paul a Del Giorgio, Robert Condon, Thierry Bouvier, Krista Longnecker, Corinne Bouvier, Evelyn Sherr, Josep M. Gasol (2011). Coherent patterns in bacterial growth, growth efficiency, and leucine metabolism along a northeastern Pacific inshore-offshore transect. Limnology and Oceanography, 56, 1-16.

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Maria Montserrat Sala, Jesús M Arrieta, Julia a Boras, Carlos M Duarte, Dolors Vaqué (2010). The impact of ice melting on bacterioplankton in the Arctic Ocean. Polar Biology, 33, 1683-1694.

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Thomas Pommier, P. R. Neal, Josep M. Gasol, Montserrat Coll, Silvia G. Acinas, Carlos Pedrós-Alió (2010). Spatial patterns of bacterial richness and evenness in the NW Mediterranean Sea explored by pyrosequencing of the 16S rRNA. Aquatic Microbial Ecology, 61, 221-233.

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Daffne C. Lopez-Sandoval, Emilio Maranon, Ana Fernández, José González, Josep M. Gasol, Itziar Lekunberri, Manuel Varela, Alejandra Calvo-Diaz, XosÉ Anxelu G. MorÁn, Xosé Antón Álvarez-Salgado, Francisco G. Figueiras (2010). Particulate and dissolved primary production by contrasting phytoplankton assemblages during mesocosm experiments in the Ria de Vigo (NW Spain). Journal of Plankton Research, 32, 1231-1240.

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Hugo Sarmento, José M Montoya, Evaristo Vázquez-Domínguez, Dolors Vaqué, Josep M. Gasol (2010). Warming effects on marine microbial food web processes: how far can we go when it comes to predictions?. Philosophical Transactions of the Royal Society B: Biological Sciences, 365, 2137-2149.

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Ina Severin, Silvia G. Acinas, Lucas J Stal (2010). Diversity of nitrogen-fixing bacteria in cyanobacterial mats: Diversity of diazotrophs in microbial mats. FEMS Microbiology Ecology, no-no.

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Mikel Latasa, Renate Scharek, Montserrat Vidal, Gemma Vila-Reixach, Andrés Gutiérrez-Rodríguez, Mikhail Emelianov, Josep M. Gasol (2010). Preferences of phytoplankton groups for waters of different trophic status in the northwestern Mediterranean Sea. Marine Ecology Progress Series, 407, 27-42.

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I. Siokou-Frangou, U. Christaki, M. G. Mazzocchi, M. Montresor, M. Ribera D'Alcalá, Dolors Vaqué, A. Zingone (2010). Plankton in the open Mediterranean Sea: a review. Biogeosciences, 7, 1543-1586.

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Itziar Lekunberri, Thomas Lefort, Estela Romero, Evaristo Vazquez-Dominguez, Cristina Romera-Castillo, Cèlia Marrase, Francesc Peters, Markus Weinbauer, Josep M. Gasol (2010). Effects of a dust deposition event on coastal marine microbial abundance and activity, bacterial community structure and ecosystem function. Journal of Plankton Research, 32, 381-396.

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Itziar Lekunberri, Alejandra Calvo-Díaz, Eva Teira, XosÉ Anxelu G. MorÁn, Francesc Peters, Mar Nieto-Cid, Oscar Espinoza-González, Isabel G. Teixeira, Josep M. Gasol (2010). Changes in bacterial activity and community composition caused by exposure to a simulated oil spill in microcosm and mesocosm experiments. Aquatic Microbial Ecology, 59, 169-183.

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Fernando Unrein, Josep M. Gasol, Ramon Massana (2010). Dinobryon faculiferum (Chrysophyta) in coastal Mediterranean seawater: presence and grazing impact on bacteria. Journal of Plankton Research, 32, 559-564.

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Irina Izaguirre, Haydee Pizarro, Paula De Tezanos Pinto, Patricia Rodriguez, Inés O'Farrell, Fernando Unrein, Josep M. Gasol (2010). Macrophyte influence on the structure and productivity of photosynthetic picoplankton in wetlands. Journal of Plankton Research, 32, 221-238.

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Pablo Sanchez, Pedro Pablo Ambrosio, Rosa Flos (2010). Stocking density and sex influence individual growth of Senegalese sole (Solea senegalensis). Aquaculture, 300, 93--101.

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Federico Baltar, Javier Arístegui, Eva Sintes, Josep M. Gasol, Thomas Reinthaler, Gerhard J. Herndl (2010). Significance of non-sinking particulate organic carbon and dark CO $_ extrm2$ fixation to heterotrophic carbon demand in the mesopelagic northeast Atlantic. 37, 2010GL043105.

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F Baltar, J Arístegui, Josep M. Gasol, Gj Herndl (2010). Prokaryotic carbon utilization in the dark ocean: growth efficiency, leucine-to-carbon conversion factors, and their relation. 60, 227--232.

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Federico Baltar, Javier Arístegui, Josep M. Gasol, Itziar Lekunberri, Gerhard J Herndl (2010). Mesoscale eddies: hotspots of prokaryotic activity and differential community structure in the ocean. 4, 975--988.

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Laura Alonso-Sáez, Jarone Pinhassi, Jakob Pernthaler, Josep M. Gasol (2010). Leucine-to-carbon empirical conversion factor experiments: does bacterial community structure have an influence?. 12, 2988--2997.

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Pierre E. Galand, Carmen Gutiérrez-Provecho, Ramon Massana, Josep M. Gasol, Emilio O. Casamayor (2010). Inter-annual recurrence of archaeal assemblages in the coastal NW Mediterranean Sea (Blanes Bay Microbial Observatory). 55, 2117--2125.

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F Baltar, J Arístegui, Josep M. Gasol, E Sintes, Hm Van Aken, Gj Herndl (2010). High dissolved extracellular enzymatic activity in the deep central Atlantic Ocean. 58, 287--302.

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Isabel Ferrera, Ramon Massana, Vanessa Balagué, Carles Pedrós-Alió, Olga Sánchez, Jordi Mas (2010). Evaluation of DNA extraction methods from complex phototrophic biofilms. Biofouling, 26, 349-357.

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Julia A. Boras, Maria Montserrat Sala, Jesus M. Arrieta, Elisabet L. Sà, Jorge Felipe, Susana Agustí, Carlos M. Duarte, Dolors Vaqué (2010). Effect of ice melting on bacterial carbon fluxes channelled by viruses and protists in the Arctic Ocean. 33, 1695--1707.

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Stephane Stenuite, Anne-Laure Tarbe, Hugo Sarmento, Fernando Unrein, Samuel Pirlot, Danny Sinyinza, Sophie Thill, Mélanie Lecomte, Bruno Leporcq, Josep M. Gasol, Jean-Pierre Descy (2009). Photosynthetic picoplankton in Lake Tanganyika: biomass distribution patterns with depth, season and basin. Journal of Plankton Research, 31, 1531-1544.

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Josep M. Gasol, Laura Alonso-Sáez, Dolors Vaqué, Federico Baltar, Maria Ll Calleja, Carlos M Duarte, Javier Arístegui (2009). Mesopelagic prokaryotic bulk and single-cell heterotrophic activity and community composition in the NW Africa–Canary Islands coastal-transition zone. Progress in Oceanography, 83, 189-196.

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S Loureiro, E Garces, Y Collos, D Vaque, J Camp (2009). Effect of marine autotrophic dissolved organic matter (DOM) on Alexandrium catenella in semi-continuous cultures. Journal of Plankton Research, 31, 1363-1372.

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Ruth-Anne Sandaa, Laura Gómez-Consarnau, Jarone Pinhassi, Lasse Riemann, Andrea Malits, Markus G Weinbauer, Josep M. Gasol, T Frede Thingstad (2009). Viral control of bacterial biodiversity – evidence from a nutrient-enriched marine mesocosm experiment. Environmental Microbiology, 11, 2585-2597.

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Fabrice Not, Javier del Campo, Vanessa Balagué, Colomban De Vargas, Ramon Massana (2009). New Insights into the Diversity of Marine Picoeukaryotes. PLoS ONE, 4, e7143.

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Rafel Simó, Maria Vila-Costa, Laura Alonso-Sáez, Clara Cardelús, Òscar Guadayol, Evaristo Vázquez-Domínguez, Josep M. Gasol (2009). Annual DMSP contribution to S and C fluxes through phytoplankton and bacterioplankton in a NW Mediterranean coastal site. Aquatic Microbial Ecology, 57, 43-55.

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Sofia Loureiro, Esther Garcés, Margarita Fernández-Tejedor, Dolors Vaqué, Jordi Camp (2009). Pseudo-nitzschia spp. (Bacillariophyceae) and dissolved organic matter (DOM) dynamics in the Ebro Delta (Alfacs Bay, NW Mediterranean Sea). Estuarine, Coastal and Shelf Science, 83, 539-549.

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Tuneo Tanaka, T. Frede Thingstad, Josep M. Gasol, Clara Cardelús, Jan Jezbera, Maria Montserrat Sala, Karel Simek, Fernando Unrein (2009). Determining the availability of phosphate and glucose for bacteria in P-limited mesocosms of NW Mediterranean surface waters. Aquatic Microbial Ecology, 56, 81-91.

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Josep M. Gasol, Evaristo Vázquez-Domínguez, Dolors Vaqué, Susana Agustí, Carlos M. Duarte (2009). Bacterial activity and diffusive nutrient supply in the oligotrophic Central Atlantic Ocean. Aquatic Microbial Ecology, 56, 1-12.

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Ramon Massana, Fernando Unrein, Raquel Rodríguez-Martínez, Irene Forn, Thomas Lefort, Jarone Pinhassi, Fabrice Not (2009). Grazing rates and functional diversity of uncultured heterotrophic flagellates. The ISME Journal, 3, 588-596.

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Òscar Guadayol, Francesc Peters, Celia Marrasé, Josep M. Gasol, Cristina Roldán, Elisa Berdalet, Ramon Massana, Anna Sabata (2009). Episodic meteorological and nutrient-load events as drivers of coastal planktonic ecosystem dynamics: a time-series analysis. Marine Ecology Progress Series, 381, 139-155.

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M Estrada, M Bayer-Giraldi, J Felipe, C Marrasé, Maria Montserrat Sala, M Vidal (2009). Light and nutrient effects on microbial communities collected during spring and summer in the Beaufort Sea. Aquatic Microbial Ecology, 54, 217-231.

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Olga Sánchez, Josep M. Gasol, Vanessa Balagué, Ramon Massana, Jordi Mas, Carlos Pedrós-Alió (2009). Influence of primer mismatch and microdiversity on DGGE results: a case study with SAR11. Aquatic Microbial Ecology, 54, 211-216.

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Raquel Rodríguez-Martínez, Matthias Labrenz, Javier del Campo, Irene Forn, Klaus Jürgens, Ramon Massana (2009). Distribution of the uncultured protist MAST-4 in the Indian Ocean, Drake Passage and Mediterranean Sea assessed by real-time quantitative PCR. Environmental Microbiology, 11, 397-408.

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S Loureiro, C Jauzein, E Garces, Y Collos, J Camp, D Vaque (2009). The significance of organic nutrients in the nutrition of Pseudo-nitzschia delicatissima (Bacillariophyceae). Journal of Plankton Research, 31, 399-410.

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Marta Sebastian, James W Ammerman (2009). The alkaline phosphatase PhoX is more widely distributed in marine bacteria than the classical PhoA. The ISME Journal, 3, 563--572.

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Federico Baltar, Javier Arístegui, Eva Sintes, Hendrik M. Van Aken, Josep M. Gasol, Gerhard J. Herndl (2009). Prokaryotic extracellular enzymatic activity in relation to biomass production and respiration in the meso- and bathypelagic waters of the (sub)tropical Atlantic. 11, 1998--2014.

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Silvia G. Acinas, Thomas H a Haverkamp, Jef Huisman, Lucas J Stal (2009). Phenotypic and genetic diversification of Pseudanabaena spp. (cyanobacteria). 3, 31--46.

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Jessica Amacher, Susanne Neuer, Ian Anderson, Ramon Massana (2009). Molecular approach to determine contributions of the protist community to particle flux. 56, 2206--2215.

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Javier Arístegui, Josep M. Gasol, Carlos M. Duarte, Gerhard J. Herndld (2009). Microbial oceanography of the dark ocean’s pelagic realm. 54, 1501--1529.

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Federico Baltar, Javier Arístegui, María F. Montero, Minerva Espino, Josep M. Gasol, Gerhard J. Herndl (2009). Mesoscale variability modulates seasonal changes in the trophic structure of nano- and picoplankton communities across the NW Africa-Canary Islands transition zone. 83, 180--188.

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Dolors Vaqué, Òscar Guadayol, Francesc Peters, Jordi Felipe, Andrea Malits, Carlos Pedrós-Alió (2009). Differential response of grazing and bacterial heterotrophic production to experimental warming in Antarctic waters. Aquatic Microbial Ecology, 54, 101-112.

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Jorge Alonso-Gutiérrez, Itziar Lekunberri, Eva Teira, Josep M. Gasol, Antonio Figueras, Beatriz Novoa (2009). Bacterioplankton composition of the coastal upwelling system of ‘Ría de Vigo’, NW Spain. 70, 493--505.

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Julia A. Boras, Maria Montserrat Sala, Evaristo Vázquez-Domínguez, Markus G. Weinbauer, Dolors Vaqué (2009). Annual changes of bacterial mortality due to viruses and protists in an oligotrophic coastal environment (NW Mediterranean). 11, 1181--1193.

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Laure Guillou, Manon Viprey, Aurelie Chambouvet, Rory M Welsh, Amy R Kirkham, Ramon Massana, David J Scanlan, Alexandra Z Worden (2008). Widespread occurrence and genetic diversity of marine parasitoids belonging to Syndiniales (Alveolata). Environmental Microbiology, 10, 3349-3365.

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Ramon Terrado, Connie Lovejoy, Ramon Massana, Warwick F Vincent (2008). Microbial food web responses to light and nutrients beneath the coastal Arctic Ocean sea ice during the winter–spring transition. Journal of Marine Systems, 74, 964-977.

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Josep-Maria Gili, Alicia Duró, Josep García-Valero, Josep M. Gasol, Sergio Rossi (2008). Herbivory in small carnivores: benthic hydroids as an example. Journal of the Marine Biological Association of the United Kingdom, 88, 1541-1546.

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Fabrice Not, Mikel Latasa, Renate Scharek, Manon Viprey, Pierre Karleskind, Vanessa Balagué, Imelda Ontoria-Oviedo, Andrea Cumino, Erica Goetze, Daniel Vaulot, Ramon Massana (2008). Protistan assemblages across the Indian Ocean, with a specific emphasis on the picoeukaryotes. Deep Sea Research Part I: Oceanographic Research Papers, 55, 1456-1473.

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Evaristo Vázquez-Domínguez, Carlos M Duarte, Susana Agustí, Klaus Jürgens, Dolors Vaqué, Josep M. Gasol (2008). Microbial plankton abundance and heterotrophic activity across the Central Atlantic Ocean. Progress in Oceanography, 79, 83-94.

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Rosa Isabel Figueroa, Esther Garcés, Ramon Massana, Jordi Camp (2008). Description, Host-specificity, and Strain Selectivity of the Dinoflagellate Parasite Parvilucifera sinerae sp. nov. (Perkinsozoa). Protist, 159, 563-578.

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Josep M. Gasol, Jarone Pinhassi, Laura Alonso-Sáez, Hugh Ducklow, Gerhard J. Herndl, Michal Koblízek, Matthias Labrenz, Yawi Luo, XosÉ Anxelu G. MorÁn, Thomas Reinthaler, Meinhard Simon (2008). Towards a better understanding of microbial carbon flux in the sea*. Aquatic Microbial Ecology, 53, 21-38.

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Elodie Foulon, Fabrice Not, Fabienne Jalabert, Thierry Cariou, Ramon Massana, Nathalie Simon (2008). Ecological niche partitioning in the picoplanktonic green alga Micromonas pusilla: evidence from environmental surveys using phylogenetic probes. Environmental Microbiology, 10, 2433-2443.

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Cecilia Demergasso, Lorena Escudero, Emilio O Casamayor, Guillermo Chong, Vanessa Balagué, Carlos Pedrós-Alió (2008). Novelty and spatio–temporal heterogeneity in the bacterial diversity of hypersaline Lake Tebenquiche (Salar de Atacama). Extremophiles, 12, 491-504.

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Ramon Massana, Carlos Pedrós-Alió (2008). Unveiling new microbial eukaryotes in the surface ocean. Current Opinion in Microbiology, 11, 213-218.

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Paul a Del Giorgio, Josep M. Gasol (2008). Physiological Structure and Single-Cell Activity in Marine Bacterioplankton. Microbial Ecology of the Oceans, 243-298.

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Ramon Massana, Baruch Karniol, Thomas Pommier, Idan Bodaker, Oded Béjà (2008). Metagenomic retrieval of a ribosomal DNA repeat array from an uncultured marine alveolate. Environmental Microbiology, 10, 1335-1343.

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Maria Montserrat Sala, Ramon Terrado, Connie Lovejoy, Fernando Unrein, Carlos Pedrós-Alió (2008). Metabolic diversity of heterotrophic bacterioplankton over winter and spring in the coastal Arctic Ocean. Environmental Microbiology, 10, 942-949.

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Eva Teira, Josep M. Gasol, María Aranguren-Gassis, Ana Fernández, Jose González, Itziar Lekunberri, X Antón Álvarez-Salgado (2008). Linkages between bacterioplankton community composition, heterotrophic carbon cycling and environmental conditions in a highly dynamic coastal ecosystem. Environmental Microbiology, 10, 906-917.

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Hugo Sarmento, Fernando Unrein, Mwapu Isumbisho, Stephane Stenuite, Josep M. Gasol, Jean-Pierre Descy (2008). Abundance and distribution of picoplankton in tropical, oligotrophic Lake Kivu, eastern Africa. Freshwater Biology, 53, 756-771.

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Tania Falcioni, Stefano Papa, Josep M. Gasol (2008). Evaluating the Flow-Cytometric Nucleic Acid Double-Staining Protocol in Realistic Situations of Planktonic Bacterial Death. Applied and Environmental Microbiology, 74, 1767-1779.

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M Estrada, Maria Montserrat Sala, K Van Lenning, M Alcaraz, J Felipe, M.J.W Veldhuis (2008). Biological interactions in enclosed plankton communities including Alexandrium catenella and copepods: Role of phosphorus. Journal of Experimental Marine Biology and Ecology, 355, 1-11.

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Laura Alonso-Sáez, Olga Sánchez, Josep M. Gasol, Vanessa Balagué, Carlos Pedrós-Alio (2008). Winter-to-summer changes in the composition and single-cell activity of near-surface Arctic prokaryotes. 10, 2444--2454.

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Pedro Pablo Ambrosio, Corrado Costa, Pablo Sánchez, Rosa Flos (2008). Stocking density and its influence on shape of Senegalese sole adults. Aquacult Int, 16, 333--343.

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Jesús M. Mercado, Teodoro Ramírez, Dolores Cortés, Marta Sebastián, Esperanza Liger, Begoña Bautista (2008). Partitioning the effects of changes in nitrate availability and phytoplankton community structure on relative nitrate uptake. Marine Ecology Progress Series, 359, 51--68.

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Katrin Zwirglmaier, Ludwig Jardillier, Martin Ostrowski, Sophie Mazard, Laurence Garczarek, Daniel Vaulot, Fabrice Not, Ramon Massana, Osvaldo Ulloa, Dave J Scanlan (2008). Global phylogeography of marine Synechococcus and Prochlorococcus reveals a distinct partitioning of lineages among oceanic biomes. Environmental Microbiology, 10, 147-161.

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Laura Alonso-Sáez, Evaristo Vázquez-Domínguez, Clara Cardelús, Jarone Pinhassi, Maria Montserrat Sala, Itziar Lekunberri, Vanessa Balagué, Maria Vila-Costa, Fernando Unrein, Ramon Massana, Rafel Simó, Josep M. Gasol (2008). Factors Controlling the Year-Round Variability in Carbon Flux Through Bacteria in a Coastal Marine System. 11, 397--409.

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Kimberly D. Chichester, Marta Sebastian, James W. Ammerman, Christa L. Colyer (2008). Enzymatic assay of marine bacterial phosphatases by capillary electrophoresis with laser‐induced fluorescence detection. ELECTROPHORESIS, 29, 3810--3816.

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Ramon Massana, Javier del Campo, Christian Dinter, Ruben Sommaruga (2007). Crash of a population of the marine heterotrophic flagellate Cafeteria roenbergensis by viral infection. Environmental Microbiology, 9, 2660-2669.

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Eva Teira, Itziar Lekunberri, Josep M. Gasol, Mar Nieto-Cid, Xosé Antón Álvarez-Salgado, Francisco G Figueiras (2007). Dynamics of the hydrocarbon-degrading Cycloclasticus bacteria during mesocosm-simulated oil spills. Environmental Microbiology, 9, 2551-2562.

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Olga Sánchez, Josep M. Gasol, Ramon Massana, Jordi Mas, Carlos Pedrós-Alió (2007). Comparison of Different Denaturing Gradient Gel Electrophoresis Primer Sets for the Study of Marine Bacterioplankton Communities. Applied and Environmental Microbiology, 73, 5962-5967.

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Evaristo Vázquez-Domínguez, Dolors Vaqué, Josep M. Gasol (2007). Ocean warming enhances respiration and carbon demand of coastal microbial plankton. Global Change Biology, 13, 1327-1334.

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Alf Skovgaard, Ramon Massana, Enric Saiz (2007). Parasitic species of the genus Blastodinium (Blastodiniphyceae) are peridinioid dinoflagellates. Journal of Phycology, 43, 553-560.

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Kamran Shalchian-Tabrizi, Håvard Kauserud, Ramon Massana, Dag Klaveness, Kjetill Jakobsen (2007). Analysis of Environmental 18S Ribosomal RNA Sequences reveals Unknown Diversity of the Cosmopolitan Phylum Telonemia. Protist, 158, 173-180.

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Connie Lovejoy, Warwick F Vincent, Sylvia Bonilla, Suzanne Roy, Marie-Josée Martineau, Ramon Terrado, Marianne Potvin, Ramon Massana, Carlos Pedrós-Alió (2007). Distribution, phylogeny, and growth of cold-adapted picoprasinophytes in Arctic Seas. Journal of Phycology, 43, 78-89.

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F Baltar, J Arístegui, Josep M. Gasol, S Hernández-León, Gj Herndl (2007). Strong coastocean and surfacedepth gradients in prokaryotic assemblage structure and activity in a coastal transition zone region. 50, 63--74.

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Fernando Unrein, Ramon Massana, Laura Alonso-Sáez, Josep M. Gasol (2007). Significant year-round effect of small mixotrophic flagellates on bacterioplankton in an oligotrophic coastal system. Limnology and Oceanography, 52, 456-469.

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Laura Alonso-Sáez, Vanessa Balagué, Elisabet L. Sà, Olga Sánchez, José M. González, Jarone Pinhassi, Ramon Massana, Jakob Pernthaler, Carlos Pedrós-Alió, Josep M. Gasol (2007). Seasonality in bacterial diversity in north-west Mediterranean coastal waters: assessment through clone libraries, fingerprinting and FISH: Seasonality in marine bacterial diversity. 60, 98--112.

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Laura Alonso-Sáez, Josep M. Gasol (2007). Seasonal Variations in the Contributions of Different Bacterial Groups to the Uptake of Low-Molecular-Weight Compounds in Northwestern Mediterranean Coastal Waters. 73, 3528--3535.

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Elke Allers, Laura Gómez-Consarnau, Jarone Pinhassi, Josep M. Gasol, Karel Šimek, Jakob Pernthaler (2007). Response of extitAlteromonadaceae and extitRhodobacteriaceae to glucose and phosphorus manipulation in marine mesocosms. 9, 2417--2429.

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Fabrice Not, Klaus Valentin, Khadidja Romari, Connie Lovejoy, Ramon Massana, Kerstin Töbe, Daniel Vaulot, Linda K Medlin (2007). Picobiliphytes: A Marine Picoplanktonic Algal Group with Unknown Affinities to Other Eukaryotes. Science, 315, 253-255.

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Esther Garcés, Magda Vila, Albert Reñé, Laura Alonso-Sáez, Silvia Anglès, Antonella Lugliè, Mercedes Masó, Josep M. Gasol (2007). Natural bacterioplankton assemblage composition during blooms of Alexandrium spp. (Dinophyceae) in NW Mediterranean coastal waters. Aquatic Microbial Ecology, 46, 55-70.

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Laura Alonso-Sáez, Josep M. Gasol, Javier Arístegui, Juan C. Vilas, Dolors Vaqué, Carlos M. Duarte, Susana Agustí (2007). Large-scale variability in surface bacterial carbon demand and growth efficiency in the subtropical northeast Atlantic Ocean. 52, 533--546.

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Emilio O. Casamayor, Isabel Ferrera, Xavier Cristina, Carles M. Borrego, Josep M. Gasol (2007). Flow cytometric identification and enumeration of photosynthetic sulfur bacteria and potential for ecophysiological studies at the single-cell level. 9, 1969--1985.

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Josep M. Gasol, Javier Arístegui (2007). Cytometric evidence reconciling the toxicity and usefulness of CTC as a marker of bacterial activity. Aquatic Microbial Ecology, 46, 71-83.

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L Alonso-Sáez, J Arístegui, J Pinhassi, L Gómez-Consarnau, Jm González, D Vaqué, S Agustí, Josep M. Gasol (2007). Bacterial assemblage structure and carbon metabolism along a productivity gradient in the NE Atlantic Ocean. 46, 43--53.

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T Frede Thingstad, Harry Havskum, Ulla Li Zweifel, Elisa Berdalet, Maria Montserrat Sala, Francesc Peters, Miquel Alcaraz, Renate Scharek, Maite Perez, Stéphan Jacquet, Gro Anita Fonnes Flaten, John R Dolan, Celia Marrasé, Fereidoun Rassoulzadegan, Åke Hagstrøm, Daniel Vaulot (2007). Ability of a “minimum” microbial food web model to reproduce response patterns observed in mesocosms manipulated with N and P, glucose, and Si. Journal of Marine Systems, 64, 15-34.

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Thierry Bouvier, Paul A. Del Giorgio, Josep M. Gasol (2007). A comparative study of the cytometric characteristics of High and Low nucleic-acid bacterioplankton cells from different aquatic ecosystems. 9, 2050--2066.

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Karel Hornák, Jan Jezbera, Jirí Nedoma, Josep M. Gasol, Karel Simek (2006). Effects of resource availability and bacterivory on leucine incorporation in different groups of freshwater bacterioplankton, assessed using microautoradiography. Aquatic Microbial Ecology, 45, 277-289.

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Carlos M Duarte, Jordi Dachs, Moira Llabrés, Patricia Alonso-Laita, Josep M. Gasol, Antonio Tovar-Sánchez, Sergio Sañudo-Wilhemy, Susana Agustí (2006). Aerosol inputs enhance new production in the subtropical northeast Atlantic. Journal of Geophysical Research: Biogeosciences, 111, 2005JG000140.

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Ramon Massana, Laure Guillou, Ramon Terrado, Irene Forn, Carlos Pedrós-Alió (2006). Growth of uncultured heterotrophic flagellates in unamended seawater incubations. Aquatic Microbial Ecology, 45, 171-180.

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Maria Montserrat Sala, Hans Güde (2006). Seasonal dynamics of pelagic and benthic (littoral and profundal) bacterial abundances and activities in a deep prealpine lake (L. Constance). Archiv für Hydrobiologie, 167, 351-369.

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Jarone Pinhassi, Laura Gómez-Consarnau, Laura Alonso-Sáez, Maria Montserrat Sala, Montserrat Vidal, Carlos Pedrós-Alió, Josep M. Gasol (2006). Seasonal changes in bacterioplankton nutrient limitation and their effects on bacterial community composition in the NW Mediterranean Sea. Aquatic Microbial Ecology, 44, 241-252.

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Maria Vila-Costa, Rafel Simó, Hyakubun Harada, Josep M. Gasol, Doris Slezak, Ronald P Kiene (2006). Dimethylsulfoniopropionate Uptake by Marine Phytoplankton. Science, 314, 652-654.

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Ramon Massana, Ramon Terrado, Irene Forn, Connie Lovejoy, Carlos Pedrós-Alió (2006). Distribution and abundance of uncultured heterotrophic flagellates in the world oceans. Environmental Microbiology, 8, 1515-1522.

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Maria Montserrat Sala, Marta Estrada, Josep M. Gasol (2006). Seasonal changes in the functional diversity of bacterioplankton in contrasting coastal environments of the NW Mediterranean. Aquatic Microbial Ecology, 44, 1-9.

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Kamran Shalchian-Tabrizi, Wenche Eikrem, Dag Klaveness, Daniel Vaulot, M.A Minge, Florence Le Gall, Khadidja Romari, Jahn Throndsen, A Botnen, Ramon Massana, Helge A. Thomsen, Kjetill S. Jakobsen (2006). Telonemia, a new protist phylum with affinity to chromist lineages. Proceedings of the Royal Society B: Biological Sciences, 273, 1833-1842.

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Connie Lovejoy, Ramon Massana, Carlos Pedrós-Alió (2006). Diversity and Distribution of Marine Microbial Eukaryotes in the Arctic Ocean and Adjacent Seas. Applied and Environmental Microbiology, 72, 3085-3095.

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Dolors Vaqué, Jordi Felipe, Maria Montserrat Sala, Albert Calbet, Marta Estrada, Miquel Alcaraz (2006). Effects of the toxic dinoflagellate Karlodinium sp. (cultured at different N/P ratios) on micro and mesozooplankton. Scientia Marina, 70, 59-65.

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XosÉ Anxelu G. MorÁn, Marta Sebastián, Carlos Pedrís-Alií, Marta Estrada (2006). Response of Southern Ocean phytoplankton and bacterioplankton production to short‐term experimental warming. Limnology and Oceanography, 51, 1791--1800.

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Teodoro Ramírez, Esperanza Liger, Jesús M. Mercado, Dolores Cortés, Manuel Vargas-Yañez, Marta Sebastián, Andreas Reul, José Aguilera, Begoña Bautista (2006). Respiratory ETS activity of plankton in the northwestern Alboran Sea: seasonal variability and relationship with hydrological and biological features. Journal of Plankton Research, 28, 629--641.

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Agnes Groisillier, Ramon Massana, Klaus Valentin, Daniel Vaulot, Laure Guillou (2006). Genetic diversity and habitats of two enigmatic marine alveolate lineages. Aquatic Microbial Ecology, 42, 277-291.

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Maria Montserrat Sala, Jarone Pinhassi, Josep M. Gasol (2006). Estimation of bacterial use of dissolved organic nitrogen compounds in aquatic ecosystems using Biolog plates. Aquatic Microbial Ecology, 42, 1-5.

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Laura Alonso-Sáez, Josep M. Gasol, Thomas Lefort, Julia Hofer, Ruben Sommaruga (2006). Effect of Natural Sunlight on Bacterial Activity and Differential Sensitivity of Natural Bacterioplankton Groups in Northwestern Mediterranean Coastal Waters. 72, 5806--5813.

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Jesús M. Mercado, Teodoro Ramírez, Dolores Cortés, Marta Sebastián, Andreas Reul, Begoña Bautista (2006). Diurnal changes in the bio-optical properties of the phytoplankton in the Alborán Sea (Mediterranean Sea). Estuarine, Coastal and Shelf Science, 69, 459--470.

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Alf Skovgaard, Ramon Massana, Vanessa Balagué, Enric Saiz (2005). Phylogenetic Position of the Copepod-Infesting Parasite Syndinium turbo (Dinoflagellata, Syndinea). Protist, 156, 413-423.

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Carlos M Duarte, Susana Agustí, Dolors Vaqué, Nona S R Agawin, Jordi Felipe, Emilio O Casamayor, Josep M. Gasol (2005). Experimental test of bacteria-phytoplankton coupling in the Southern Ocean. Limnology and Oceanography, 50, 1844-1854.

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Maria Montserrat Sala, Vanessa Balagué, Carlos Pedrós-Alió, Ramon Massana, Jordi Felipe, Laura Arin, Hassina Illoul, Marta Estrada (2005). Phylogenetic and functional diversity of bacterioplankton during Alexandrium spp. blooms. FEMS Microbiology Ecology, 54, 257-267.

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Evaristo Vázquez-Domínguez, Josep M. Gasol, Susana Agustí, Carlos M Duarte, Dolors Vaqué (2005). Growth and grazing losses of prokaryotes in the central Atlantic Ocean. Journal of Plankton Research, 27, 1055-1066.

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Fabrice Not, Ramon Massana, Mikel Latasa, Dominique Marie, Céline Colson, Wenche Eikrem, Carlos Pedrós-Alió, Daniel Vaulot, Nathalie Simon (2005). Late summer community composition and abundance of photosynthetic picoeukaryotes in Norwegian and Barents Seas. Limnology and Oceanography, 50, 1677-1686.

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Josep M. Gasol, Esther Garcés, Magda Vila (2005). Strong small-scale temporal bacterial changes associated with the migrations of bloom-forming dinoflagellates. Harmful Algae, 4, 771-781.

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Karel Šimek, Karel Horňák, Jan Jezbera, Michal Mašín, Jiří Nedoma, Josep M. Gasol, Michael Schauer (2005). Influence of Top-Down and Bottom-Up Manipulations on the R-BT065 Subcluster of β-Proteobacteria, an Abundant Group in Bacterioplankton of a Freshwater Reservoir. Applied and Environmental Microbiology, 71, 2381-2390.

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Ruben Sommaruga, Julia S Hofer, Laura Alonso-Sáez, Josep M. Gasol (2005). Differential Sunlight Sensitivity of Picophytoplankton from Surface Mediterranean Coastal Waters. Applied and Environmental Microbiology, 71, 2154-2157.

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Fei Zhu, Ramon Massana, Fabrice Not, Dominique Marie, Daniel Vaulot (2005). Mapping of picoeucaryotes in marine ecosystems with quantitative PCR of the 18S rRNA gene. FEMS Microbiology Ecology, 52, 79-92.

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Teodoro Ramírez, Dolores Cortés, Jesús María Mercado, Manuel Vargas-Yañez, Marta Sebastián, Esperanza Liger (2005). Seasonal dynamics of inorganic nutrients and phytoplankton biomass in the NW Alboran Sea. Estuarine, Coastal and Shelf Science, 65, 654--670.

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Jesús M. Mercado, Teodoro Ramírez, Dolores Cortés, Marta Sebastián, Manuel Vargas-Yáñez (2005). Seasonal and inter-annual variability of the phytoplankton communities in an upwelling area of the Alborán Sea (SW Mediterranean Sea). Scientia Marina, 69, 451--465.

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Josefina García-Cantizano, Emilio O. Casamayor, Josep M. Gasol, Ricardo Guerrero, Carlos Pedrós-Alió (2005). Partitioning of CO2 Incorporation Among Planktonic Microbial Guilds and Estimation of In Situ Specific Growth Rates. 50, 230--241.

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Fernando Unrein, Irina Izaguirre, Ramon Massana, Vanessa Balagué, Josep M. Gasol (2005). Nanoplankton assemblages in maritime Antarctic lakes: characterisation and molecular fingerprinting comparison. Aquatic Microbial Ecology, 40, 269-282.

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Maria Montserrat Sala, Laura Arin, Vanessa Balagué, Jordi Felipe, Òscar Guadayol, Dolors Vaqué (2005). Functional diversity of bacterioplankton assemblages in western Antarctic seawaters during late spring. Marine Ecology Progress Series, 292, 13-21.

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Javier Arístegui, Carlos M. Duarte, Josep M. Gasol, Laura Alonso-Sáez (2005). Active mesopelagic prokaryotes support high respiration in the subtropical northeast Atlantic Ocean. 32, 2004GL021863.

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Aia Oz, Gazalah Sabehi, Michal Koblízek, Ramon Massana, Oded Béjà (2005). Roseobacter Like Bacteria in Red and Mediterranean Sea Aerobic Anoxygenic Photosynthetic Populations. Applied and Environmental Microbiology, 71, 344-353.

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Ramon Massana, Vanessa Balagué, Laure Guillou, Carlos Pedrós-Alió (2004). Picoeukaryotic diversity in an oligotrophic coastal site studied by molecular and culturing approaches. FEMS Microbiology Ecology, 50, 231-243.

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Jarone Pinhassi, Maria Montserrat Sala, Harry Havskum, Francesc Peters, Òscar Guadayol, Andrea Malits, Cèlia Marrasé (2004). Changes in Bacterioplankton Composition under Different Phytoplankton Regimens. Applied and Environmental Microbiology, 70, 6753-6766.

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Maria Montserrat Sala, Klaus Jürgens (2004). Bacterial growth on macrophyte leachate in the presence and absence of bacterivorous protists. Archiv für Hydrobiologie, 161, 371-389.

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Marta Estrada, Peter Henriksen, Josep M. Gasol, Emilio O Casamayor, Carlos Pedró Alió (2004). Diversity of planktonic photoautotrophic microorganisms along a salinity gradient as depicted by microscopy, flow cytometry, pigment analysis and DNA-based methods. FEMS Microbiology Ecology, 49, 281-293.

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Maria Montserrat Sala, Hans Güde (2004). Ectoenzymatic activities and heterotrophic bacteria decomposing detritus. Archiv für Hydrobiologie, 160, 289-303.

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Beatriz Díez, Ramon Massana, Marta Estrada, Carlos Pedrós-Alió (2004). Distribution of eukaryotic picoplankton assemblages across hydrographic fronts in the Southern Ocean, studied by denaturing gradient gel electrophoresis. Limnology and Oceanography, 49, 1022-1034.

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Ramon Massana, Jose Castresana, Vanessa Balagué, Laure Guillou, Khadidja Romari, Agnès Groisillier, Klaus Valentin, Carlos Pedrós-Alió (2004). Phylogenetic and Ecological Analysis of Novel Marine Stramenopiles. Applied and Environmental Microbiology, 70, 3528-3534.

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Isabel Ferrera, Ramon Massana, Emilio O. Casamayor, Vanessa Balagué, Olga Sánchez, Carlos Pedrós-Alió, Jordi Mas (2004). High-diversity biofilm for the oxidation of sulfide-containing effluents. Applied Microbiology and Biotechnology, 64, 726-734.

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Laure Guillou, Wenche Eikrem, Marie-Josèphe Chrétiennot-Dinet, Florence Le Gall, Ramon Massana, Khadidja Romari, Carlos Pedrós-Alió, Daniel Vaulot (2004). Diversity of Picoplanktonic Prasinophytes Assessed by Direct Nuclear SSU rDNA Sequencing of Environmental Samples and Novel Isolates Retrieved from Oceanic and Coastal Marine Ecosystems. Protist, 155, 193-214.

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Hans Güde, Petra Teiber, Susanne Rolinski, Maria Montserrat Sala (2004). Comparison of production and degradation of organic matter at a littoral site of the prealpine Lake Constance. Limnologica, 34, 117-123.

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M Sebastián, J Arístegui, Mf Montero, Fx Niell (2004). Kinetics of alkaline phosphatase activity, and effect of phosphate enrichment: a case study in the NW African upwelling region. Marine Ecology Progress Series, 270, 1--13.

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Josep M. Gasol, Emilio O. Casamayor, Ian Joint, Kristine Garde, Kim Gustavson, Susana Benlloch, Beatriz Díez, Michael Schauer, Ramon Massana, Carlos Pedrós-Alió (2004). Control of heterotrophic prokaryotic abundance and growth rate in hypersaline planktonic environments. Aquatic Microbial Ecology, 34, 193-206.

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Marta Sebastián, Francisco X. Niell (2004). Alkaline phosphatase activity in marine oligotrophic environments: implications of single-substrate addition assays for potential activity estimations. Marine Ecology Progress Series, 277, 285--290.

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Marta Sebastián, Javier Arístegui, María F. Montero, Jose Escanez, F. Xavier Niell (2004). Alkaline phosphatase activity and its relationship to inorganic phosphorus in the transition zone of the North-western African upwelling system. Progress in Oceanography, 62, 131--150.

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Gazalah Sabehi, Ramon Massana, Joseph P Bielawski, Mira Rosenberg, Edward F Delong, Oded Béjà (2003). Novel Proteorhodopsin variants from the Mediterranean and Red Seas. Environmental Microbiology, 5, 842-849.

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Dikla Man, Weiwu Wang, Gazalah Sabehi, L. Aravind, Anton F. Post, Ramon Massana, Elena N. Spudich, John L. Spudich, Oded Béjà (2003). Diversification and spectral tuning in marine proteorhodopsins. The EMBO Journal, 22, 1725-1731.

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Gil Zeidner, Christina M Preston, Edward F Delong, Ramon Massana, Anton F Post, David J Scanlan, Oded Béjà (2003). Molecular diversity among marine picophytoplankton as revealed by psbA analyses. Environmental Microbiology, 5, 212-216.

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Luz Allende, Irina Izaguirre (2003). The role of physical stability on the establishment of steady states in the phytoplankton community of two Maritime Antarctic lakes. 502, 211--224.

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Michael Schauer, Vanessa Balagué, Carlos Pedrós-Alió, Ramon Massana (2003). Seasonal changes in the taxonomic composition of bacterioplankton in a coastal oligotrophic system. Aquatic Microbial Ecology, 31, 163-174.

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A Calbet, D Vaqué, J Felipe, M Vila, Maria Montserrat Sala, M Alcaraz, M Estrada (2003). Relative grazing impact of microzooplankton and mesozooplankton on a bloom of the toxic dinoflagellate Alexandrium minutum. 259, 303--309.

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Ramon Massana, Klaus Jürgens (2003). Composition and population dynamics of planktonic bacteria and bacterivorous flagellates in seawater chemostat cultures. Aquatic Microbial Ecology, 32, 11-22.

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Montserrat Vidal, Carlos M Duarte, Susana Agustí, Josep M. Gasol, Dolors Vaqué (2003). Alkaline phosphatase activities in the central Atlantic Ocean indicate large areas with phosphorus deficiency. Marine Ecology Progress Series, 262, 43-53.

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XosÉ Anxelu G. MorÁn, Marta Estrada, Josep M. Gasol, Carlos Pedrós-Alió (2002). Dissolved Primary Production and the Strength of Phytoplankton -Bacterioplankton Coupling in Contrasting Marine Regions. Microbial Ecology, 44, 217-223.

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Ramon Massana, Laure Guillou, Beatriz Díez, Carlos Pedrós-Alió (2002). Unveiling the Organisms behind Novel Eukaryotic Ribosomal DNA Sequences from the Ocean. Applied and Environmental Microbiology, 68, 4554-4558.

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F Peters (2002). Turbulence and the microbial food web: effects on bacterial losses to predation and on community structure. Journal of Plankton Research, 24, 321-331.

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Josep M. Gasol (2002). Jacob Kalff: Limnology: Prentice Hall, Upper Saddle River, NJ, 2002. 608 pp, 25.2 × 20 cm (ISBN: 0-13-033775-7) US$ 90. International Microbiology, 5, 45-46.

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Manuel Vargas‐Yáñez, Teodoro Ramírez, Dolores Cortés, Marta Sebastián, Francisco Plaza (2002). Warming trends in the continental shelf of Málaga Bay (ALBORÁN SEA). Geophysical Research Letters, 29,

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Núria Guixa-Boixereu, Dolors Vaqué, Josep M. Gasol, Jaime Sánchez-Cámara, Carlos Pedrós-Alió (2002). Viral distribution and activity in Antarctic waters. Deep Sea Research Part II: Topical Studies in Oceanography, 49, 827-845.

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Ricardo Anadón, Florentina Alvarez-Marqués, Emilio Fernández, Manuel Varela, Manuel Zapata, Josep M. Gasol, Dolors Vaqué (2002). Vertical biogenic particle flux during Austral summer in the Antarctic Peninsula area. 49, 883--901.

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Maria Montserrat Sala, Francesc Peters, Josep M. Gasol, Carlos Pedrós-Alió, Cèlia Marrasé, Dolors Vaqué (2002). Seasonal and spatial variations in the nutrient limitation of bacterioplankton growth in the northwestern Mediterranean. Aquatic Microbial Ecology, 27, 47-56.

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Carlos Pedrós-Alió, Dolors Vaqué, Núria Guixa-Boixereu, Josep M. Gasol (2002). Prokaryotic plankton biomass and heterotrophic production in western Antarctic waters during the 1995–1996 Austral summer. Deep Sea Research Part II: Topical Studies in Oceanography, 49, 805-825.

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Susana Benlloch, Arantxa López-López, Emilio O. Casamayor, Lise Øvreås, Victoria Goddard, Frida Lise Daae, Gary Smerdon, Ramon Massana, Ian Joint, Frede Thingstad, Carlos Pedrós-Alió, Francisco Rodríguez-Valera (2002). Prokaryotic genetic diversity throughout the salinity gradient of a coastal solar saltern. 4, 349--360.

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Jesús García-Martínez, Silvia G. Acinas, Ramon Massana, Francisco Rodríguez-Valera (2002). Prevalence and microdiversity of Alteromonas macleodii-like microorganisms in different oceanic regions. Environmental Microbiology, 4, 42-50.

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XosÉ Anxelu G. MorÁn, Josep M. Gasol, Carlos Pedrós-Alió, Marta Estrada (2002). Partitioning of phytoplanktonic organic carbon production and bacterial production along a coastal-offshore gradient in the NE Atlantic during different hydrographic regimes. Aquatic Microbial Ecology, 29, 239-252.

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Dolors Vaqué, Núria Guixa-Boixereu, Josep M. Gasol, Carlos Pedrós-Alió (2002). Distribution of microbial biomass and importance of protists in regulating prokaryotic assemblages in three areas close to the Antarctic Peninsula in spring and summer 1995/96. Deep Sea Research Part II: Topical Studies in Oceanography, 49, 847-867.

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M Maar, L Arin, R Simó, Maria Montserrat Sala, F Peters, C Marrasé (2002). Combined effects of nutrients and small-scale turbulence in a microcosm experiment. II. Dynamics of organic matter and phosphorus. Aquatic Microbial Ecology, 29, 63-72.

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L Arin, C Marrasé, M Maar, F Peters, Maria Montserrat Sala, M Alcaraz (2002). Combined effects of nutrients and small-scale turbulence in a microcosm experiment. I. Dynamics and size distribution of osmotrophic plankton. 29, 51--61.

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Jean-François Dumestre, Emilio O. Casamayor, Ramon Massana, Carlos Pedrós-Alió (2002). Changes in bacterial and archaeal assemblages in an equatorial river induced by the water eutrophication of Petit Saut dam reservoir (French Guiana). Aquatic Microbial Ecology, 26, 209-221.

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Emilio O. Casamayor, Ramon Massana, Susana Benlloch, Lise Øvreås, Beatriz Díez, Victoria J. Goddard, Josep M. Gasol, Ian Joint, Francisco Rodríguez-Valera, Carlos Pedrós-Alió (2002). Changes in archaeal, bacterial and eukaryal assemblages along a salinity gradient by comparison of genetic fingerprinting methods in a multipond solar saltern. 4, 338--348.

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Josep M. Gasol, Marta Comerma, , Juan Carlos García, Joan Armengol, Emilio O Casamayor, Petra Kojecká, Karel Šimek (2002). A transplant experiment to identify the factors controlling bacterial abundance, activity, production, and community composition in a eutrophic canyon-shaped reservoir. Limnology and Oceanography, 47, 62-77.

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Josep M. Gasol, Carlos Pedrós-Alió, Dolors Vaqué (2002). [No title found]. Antonie van Leeuwenhoek, 81, 435-452.

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Xosé Anxelu G Morán, Ramon Massana, Josep M. Gasol (2001). Light Conditions Affect the Measurement of Oceanic Bacterial Production via Leucine Uptake. Applied and Environmental Microbiology, 67, 3795-3801.

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Beatriz Dı́ez, Carlos Pedrós-Alió, Ramon Massana (2001). Study of Genetic Diversity of Eukaryotic Picoplankton in Different Oceanic Regions by Small-Subunit rRNA Gene Cloning and Sequencing. Applied and Environmental Microbiology, 67, 2932-2941.

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Ramon Massana, Carlos Pedrόs-Aliό, Emilio O Casamayor, Josep M. Gasol (2001). Changes in marine bacterioplankton phylogenetic composition during incubations designed to measure biogeochemically significant parameters. Limnology and Oceanography, 46, 1181-1188.

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Beatriz Dı́ez, Carlos Pedrós-Alió, Terence L Marsh, Ramon Massana (2001). Application of Denaturing Gradient Gel Electrophoresis (DGGE) To Study the Diversity of Marine Picoeukaryotic Assemblages and Comparison of DGGE with Other Molecular Techniques. Applied and Environmental Microbiology, 67, 2942-2951.

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Maria Montserrat Sala, M Karner, L Arin, C Marrasé (2001). Measurement of ectoenzyme activities as an indication of inorganic nutrient imbalance in microbial communities. Aquatic Microbial Ecology, 23, 301-311.

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Susana Agusti, Carlos M Duarte, Dolors Vaqué, Mette Hein, Josep M. Gasol, Montserrat Vidal (2001). Food-web structure and elemental (C, N and P) fluxes in the eastern tropical North Atlantic. 48, 2295--2321.

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Dolors Vaqué, Emilio O. Casamayor, Josep M. Gasol (2001). Dynamics of whole community bacterial production and grazing losses in seawater incubations as related to the changes in the proportions of bacteria with different DNA content. Aquatic Microbial Ecology, 25, 163-177.

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M. D. Doval, Xose A. Álvarez-Salgado, Josep M. Gasol, L. M. Lorenzo, I. Mirón, F. G. Figueiras, Carlos Pedrós-Alió (2001). Dissolved and suspended organic carbon in the Atlantic sector of the Southern Ocean. Stock dynamics in upper ocean waters. Marine Ecology Progress Series, 223, 27-38.

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XosÉ Anxelu G. MorÁn, Josep M. Gasol, Carlos Pedrós-Alió, Marta Estrada (2001). Dissolved and particulate primary production and bacterial production in offshore Antarctic waters during austral summer: coupled or uncoupled?. Marine Ecology Progress Series, 222, 25-39.

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José M González, Rafel Simó, Ramon Massana, Joseph S Covert, Emilio O Casamayor, Carlos Pedrós-Alió, Mary Ann Moran (2000). Bacterial Community Structure Associated with a Dimethylsulfoniopropionate-Producing North Atlantic Algal Bloom. Applied and Environmental Microbiology, 66, 4237-4246.

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Michael Schauer, Ramon Massana, Carlos Pedrós-Alió (2000). Spatial differences in bacterioplankton composition along the Catalan coast (NW Mediterranean) assessed by molecular fingerprinting. FEMS Microbiology Ecology, 33, 51-59.

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Josep M. Gasol, Paul a Del Giorgio (2000). Using flow cytometry for counting natural planktonic bacteria and understanding the structure of planktonic bacterial communities. Scientia Marina, 64, 197-224.

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Ramon Massana, Edward F Delong, Carlos Pedrós-Alió (2000). A Few Cosmopolitan Phylotypes Dominate Planktonic Archaeal Assemblages in Widely Different Oceanic Provinces. Applied and Environmental Microbiology, 66, 1777-1787.

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Carlos PedrÃ³s-AliÃ³, Juan I CalderÃ³n-Paz, Marlie H MacLean, GlÃ²ria Medina, CÃ¨lia MarrasÃ©, Josep M. Gasol, NÃºria Guixa-Boixereu (2000). The microbial food web along salinity gradients. FEMS Microbiology Ecology, 32, 143-155.

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Carlos PedrÃ³s-AliÃ³, Juan I CalderÃ³n-Paz, Josep M. Gasol (2000). Comparative analysis shows that bacterivory, not viral lysis, controls the abundance of heterotrophic prokaryotic plankton. FEMS Microbiology Ecology, 32, 157-165.

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Klaus Jürgens, Josep M. Gasol, Dolors Vaqué (2000). Bacteria–flagellate coupling in microcosm experiments in the Central Atlantic Ocean. Journal of Experimental Marine Biology and Ecology, 245, 127-147.

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Josep M. Gasol, Carlos M Duarte (2000). Comparative analyses in aquatic microbial ecology: how far do they go?. FEMS Microbiology Ecology, 31, 99-106.

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Carlos M. Duarte, Susana Agustí, Josep M. Gasol, Dolors Vaqué, Evaristo Vazquez-Dominguez (2000). Effect of nutrient supply on the biomass structure of planktonic communities: an experimental test on a Mediterranean coastal community. Marine Ecology Progress Series, 206, 87-95.

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Maria Montserrat Sala, H Güde (1999). Role of protozoans on the microbial ectoenzymatic activity during the degradation of macrophytes. Aquatic Microbial Ecology, 20, 75-82.

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Evaristo Vazquez-Dominguez, Francesc Peters, Josep M. Gasol, Dolors Vaqué (1999). Measuring the grazing losses of picoplankton: methodological improvements in the use of fluorescently labeled tracers combined with flow cytometry. Aquatic Microbial Ecology, 20, 119-128.

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Josep M. Gasol, Xosé A. G. Morán (1999). Effects of filtration on bacterial activity and picoplankton community structure as assessed by flow cytometry. Aquatic Microbial Ecology, 16, 251-264.

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Núria Guixa-Boixereu, Dolors Vaqué, Josep M. Gasol, Carlos Pedrós-Alió (1999). Distribution of viruses and their potential effect on bacterioplankton in an oligotrophic marine system. Aquatic Microbial Ecology, 19, 205-213.

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Alison E. Murray, Andrew Blakis, Ramon Massana, S Strawzewski, Uta Passow, Alice Alldredge, Edward F. DeLong (1999). A time series assessment of planktonic archaeal variability in the Santa Barbara Channel. Aquatic Microbial Ecology, 20, 129-145.

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Xose Anxelu G. Morán, Josep M. Gasol, Laura Arin, Marta Estrada (1999). A comparison between glass fiber and membrane filters for the estimation of phytoplankton POC and DOC production. Marine Ecology Progress Series, 187, 31-41.

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Alison E. Murray, Christina M. Preston, Ramon Massana, Lance T. Taylor, Andrew Blakis, Ke-Ying Wu, Edward F. DeLong (1998). Seasonal and Spatial Variability of Bacterial and Archaeal Assemblages in the Coastal Waters near Anvers Island, Antarctica. Applied and Environmental Microbiology, 64, 2585-2595.

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Ramon Massana, Lance T Taylor, Alison E Murray, Ke Y Wu, Wade H Jeffrey, Edward F Delong (1998). Vertical distribution and temporal variation of marine planktonic archaea in the Gerlache Strait, Antarctica, during early spring. Limnology and Oceanography, 43, 607-617.

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Edward F Delong, Linda L King, Ramon Massana, Henry Cittone, Alison Murray, Christa Schleper, Stuart G Wakeham (1998). Dibiphytanyl Ether Lipids in Nonthermophilic Crenarchaeotes. Applied and Environmental Microbiology, 64, 1133-1138.

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Juan José Vergara, Marta Sebastián, José Lucas Pérez-Lloréns, Ignacio Hernández (1998). Photoacclimation of Ulva rigida and U. rotundata (Chlorophyta) arranged in canopies. Marine Ecology Progress Series, 165, 283--292.

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Francesc Peters, Cèlia Marrasé, Josep M. Gasol, Maria Montserrat Sala, Laura Arin (1998). Effects of turbulence on bacterial growth mediated through food web interactions. Marine Ecology Progress Series, 172, 293-303.

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Josep M. Gasol, Md Doval, J Pinhassi, Ji Calderón-Paz, N Guixa-Boixareu, D Vaqué, C Pedrós-Alió (1998). Diel variations in bacterial heterotrophic activity and growth in the northwestern Mediterranean Sea. 164, 107--124.

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Josep M. Gasol, Paul a Del Giorgio, Carlos M Duarte (1997). Biomass distribution in marine planktonic communities. Limnology and Oceanography, 42, 1353-1363.

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Ramon Massana, Alison E Murray, Christina M Preston, Edward F Delong (1997). Vertical distribution and phylogenetic characterization of marine planktonic Archaea in the Santa Barbara Channel. Applied and Environmental Microbiology, 63, 50-56.

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Carlos M. Duarte, Josep M. Gasol, Dolors Vaqué (1997). Role of experimental approaches in marine microbial ecology. Aquatic Microbial Ecology, 13, 101-111.

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E. Berdalet, Dolors Vaqué, Laura Arin, Marta Estrada, Miquel Alcaraz, José A. Fernández (1997). Hydrography and biochemical indicators of microplankton biomass in the Bransfield Strait (Antarctica) during January 1994. 17, 31--38.

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Paul a Del Giorgio, Josep M. Gasol, Dolors Vaqué, Paola Mura, Susana Agustí, Carlos M Duarte (1996). Bacterioplankton community structure: Protists control net production and the proportion of active bacteria in a coastal marine community. Limnology and Oceanography, 41, 1169-1179.

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M. P. Mura, Susana Agustí, Paul A. Del Giorgio, Josep M. Gasol, Dolors Vaqué, Carlos M. Duarte (1996). Loss-controlled phytoplankton production in nutrient-poor littoral waters of the NW Mediterranean:in situ experimental evidence. Marine Ecology Progress Series, 130, 213-219.

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Ramon Massana, Josefina García-Cantizano, Carlos Pedrós-Alió (1996). Components, structure and fluxes of the microbial food web in a small, stratified lake. Aquatic Microbial Ecology, 11, 279-288.

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Paul a Del Giorgio, Josep M. Gasol (1995). Biomass Distribution in Freshwater Plankton Communities. The American Naturalist, 146, 135-152.

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Carlos Pedrós-Alió, Ramon Massana, Mikel Latasa, Josefina García-Cantizano, Josep M. Gasol (1995). Predation by ciliates on a metalimnetic Cryptomonas population: feeding rates, impact and effects of vertical migration. Journal of Plankton Research, 17, 2131-2154.

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Josep M. Gasol, Andrew M Simons, Jacob Kalff (1995). Patterns in the top-down versus bottom-up regulation of heterotrophic nanoflagellates in temperate lakes. Journal of Plankton Research, 17, 1879-1903.

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Josep M. Gasol, Paul Del Giorgio, Ramon Massana, Carlos M. Duarte (1995). Active versus inactive bacteria:size-dependence in a coastal marine plankton community. Marine Ecology Progress Series, 128, 91-97.

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Klaus Jürgens, Josep M. Gasol, Ramon Massana, Carlos Pedrós-Alió (1994). Control of heterotrophic bacteria and protozoans by Daphnia pulex in the epilimnion of Lake Cisó. Archiv für Hydrobiologie, 131, 55-78.

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Ramon Massana, Carlos Pedrós-Alió (1994). Role of Anaerobic Ciliates in Planktonic Food Webs: Abundance, Feeding, and Impact on Bacteria in the Field. Applied and Environmental Microbiology, 60, 1325-1334.

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Ramon Massana, Claudius K Stumm, Carlos Pedrós-Alió (1994). Effects of Temperature, Sulfide, and Food Abundance on Growth and Feeding of Anaerobic Ciliates. Applied and Environmental Microbiology, 60, 1317-1324.

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Ramon Massana, Carlos Pedrós-Alió (1994). A method to determine integrated predation in stratified waters. Limnology and Oceanography, 39, 248-262.

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Ramon Massana, Josep M. Gasol, Klaus Jürgens, Carlos Pedrós-Alió (1994). Impact of Daphnia pulex on a metalimnetic microbial community. Journal of Plankton Research, 16, 1379-1399.

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Josep M. Gasol, Bettina Sander, Marc Schallenberg (1993). Production of bacteria in freshwater sediments: Comparison of different cell-specific measurements to mineralization rates. SIL Proceedings, 1922-2010, 25, 325-330.

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Josep M. Gasol, Dolors Vaqué (1993). Lack of coupling between heterotrophic nanoflagellates and bacteria: A general phenomenon across aquatic systems?. Limnology and Oceanography, 38, 657-665.

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Josep M. Gasol, Josefina García-Cantizano, Ramon Massana, Ricardo Guerrero, Carlos Pedrós-Alió (1993). Physiological ecology of a metalimnetic extitCryptomonas population: relationships to light, sulfide and nutrients. 15, 255--275.

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Josep M. Gasol (1993). Benthic flagellates and ciliates in fine freshwater sediments: Calibration of a live counting procedure and estimation of their abundances. 25,

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Josep M. Gasol, Ricardo Guerrero, Carlos Pedrós-Alió (1992). Spatial and temporal dynamics of a metalimnetic extitCryptomonas peak. 14, 1565--1579.

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Paul a White, Jacob Kalff, Joseph B Rasmussen, Josep M. Gasol (1991). The effect of temperature and algal biomass on bacterial production and specific growth rate in freshwater and marine habitats. Microbial Ecology, 21, 99-118.

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Josep M. Gasol, Ricardo Guerrero, Carlos Pedró Alió (1991). Seasonal variations in size structure and procaryotic dominance in sulfurous Lake Cisó. Limnology and Oceanography, 36, 860-872.

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Ramon Massana, Hans Güde (1991). Comparison between three methods for determining flagellate abundance in natural waters. Ophelia, 33, 197-203.

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Josep M. Gasol, Josefina García-Cantizano, Ramon Massana, Francesc Peters, Ricardo Guerrero, Carlos Pedrós-Alió (1991). Diel changes in the microstratification of the metalimnetic community in Lake Cisó. Hydrobiologia, 211, 227-240.

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Carlos M Duarte, Celia Marrasé, Dolors Vaqué, Marta Estrada (1990). Counting error and the quantitative analysis of phytoplankton communities. Journal of Plankton Research, 12, 295-304.

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C Marras�, C M Duarte, D Vaqu� (1989). Succession patterns of phytoplankton blooms: directionality and influence of algal cell size. Marine Biology, 102, 43-48.

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Dolors Vaqué, Cèlia Marrasé, V. Iñiguez, Miquel Alcaraz (1989). Zooplankton influence on the phytoplankton-bacterioplankton coupling. Journal of Plankton Research, 11, 625-632.

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Carlos Pedrós-Alió, Jordi Mas, Josep M. Gasol, Ricardo Guerrero (1989). Sinking speeds of free-living phototrophic bacteria determined with covered and uncovered traps. Journal of Plankton Research, 11, 887-905.

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D Vagué, Cm Duarte, C Marrase (1989). Phytoplankton colonization by bacteria: encounter probability as a limiting factor. Marine Ecology Progress Series, 54, 137-140.

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Carlos Pedrós-Alió, Josep M. Gasol, Ricardo Guerrero (1987). On the ecology of a Cryptomonas phaseolus population forming a metalimnetic bloom in Lake Cisó, Spain: Annual distribution and loss factors. Limnology and Oceanography, 32, 285-298.

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